Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PALB2Q86YC2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PALB2Q86YC2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PALB2Q86YC2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PALB2Q86YC2 KRT18P10-201ENST00000388836 1287 ntBASIC25.56■■□□□ 1.68
PALB2Q86YC2 AC022211.4-201ENST00000625094 2161 ntBASIC25.56■■□□□ 1.68
PALB2Q86YC2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
PALB2Q86YC2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PALB2Q86YC2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.55■■□□□ 1.68
PALB2Q86YC2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.55■■□□□ 1.68
PALB2Q86YC2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PALB2Q86YC2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PALB2Q86YC2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PALB2Q86YC2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PALB2Q86YC2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PALB2Q86YC2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.54■■□□□ 1.68
PALB2Q86YC2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PALB2Q86YC2 Z92544.1-202ENST00000571933 1220 ntBASIC25.54■■□□□ 1.68
PALB2Q86YC2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PALB2Q86YC2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PALB2Q86YC2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PALB2Q86YC2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PALB2Q86YC2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.53■■□□□ 1.68
PALB2Q86YC2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PALB2Q86YC2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
PALB2Q86YC2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PALB2Q86YC2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.53■■□□□ 1.68
PALB2Q86YC2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PALB2Q86YC2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PALB2Q86YC2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PALB2Q86YC2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PALB2Q86YC2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PALB2Q86YC2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PALB2Q86YC2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PALB2Q86YC2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.52■■□□□ 1.68
PALB2Q86YC2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PALB2Q86YC2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.52■■□□□ 1.68
PALB2Q86YC2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PALB2Q86YC2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.52■■□□□ 1.68
PALB2Q86YC2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PALB2Q86YC2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
PALB2Q86YC2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
PALB2Q86YC2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.51■■□□□ 1.67
PALB2Q86YC2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.51■■□□□ 1.67
PALB2Q86YC2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.51■■□□□ 1.67
PALB2Q86YC2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.51■■□□□ 1.67
PALB2Q86YC2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.51■■□□□ 1.67
PALB2Q86YC2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PALB2Q86YC2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PALB2Q86YC2 AC138932.3-201ENST00000567634 1902 ntBASIC25.51■■□□□ 1.67
PALB2Q86YC2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PALB2Q86YC2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.5■■□□□ 1.67
PALB2Q86YC2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PALB2Q86YC2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PALB2Q86YC2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PALB2Q86YC2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.5■■□□□ 1.67
PALB2Q86YC2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
PALB2Q86YC2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.5■■□□□ 1.67
PALB2Q86YC2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
PALB2Q86YC2 AC022616.5-201ENST00000518796 181 ntBASIC25.5■■□□□ 1.67
PALB2Q86YC2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PALB2Q86YC2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PALB2Q86YC2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PALB2Q86YC2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PALB2Q86YC2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
PALB2Q86YC2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PALB2Q86YC2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.49■■□□□ 1.67
PALB2Q86YC2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PALB2Q86YC2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.49■■□□□ 1.67
PALB2Q86YC2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PALB2Q86YC2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PALB2Q86YC2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
PALB2Q86YC2 AC142381.3-201ENST00000568208 1670 ntBASIC25.48■■□□□ 1.67
PALB2Q86YC2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PALB2Q86YC2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.48■■□□□ 1.67
PALB2Q86YC2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PALB2Q86YC2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
PALB2Q86YC2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
PALB2Q86YC2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PALB2Q86YC2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PALB2Q86YC2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PALB2Q86YC2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
PALB2Q86YC2 KRT125P-201ENST00000546827 989 ntBASIC25.47■■□□□ 1.67
PALB2Q86YC2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PALB2Q86YC2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PALB2Q86YC2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.46■■□□□ 1.67
PALB2Q86YC2 BX664725.1-201ENST00000438252 379 ntBASIC25.46■■□□□ 1.67
PALB2Q86YC2 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.46■■□□□ 1.67
PALB2Q86YC2 MIR4787-201ENST00000607364 84 ntBASIC25.46■■□□□ 1.67
PALB2Q86YC2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PALB2Q86YC2 AC097639.1-201ENST00000565519 1891 ntBASIC25.46■■□□□ 1.67
PALB2Q86YC2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.46■■□□□ 1.67
PALB2Q86YC2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PALB2Q86YC2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PALB2Q86YC2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PALB2Q86YC2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PALB2Q86YC2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PALB2Q86YC2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.45■■□□□ 1.66
PALB2Q86YC2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
PALB2Q86YC2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms