Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
FOXR1Q6PIV2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR1Q6PIV2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.26■■□□□ 1.47
FOXR1Q6PIV2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.26■■□□□ 1.47
FOXR1Q6PIV2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR1Q6PIV2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 ATP5G2P3-201ENST00000429083 425 ntBASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 AC126177.7-201ENST00000547904 679 ntBASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 AC092296.2-201ENST00000589470 999 ntBASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR1Q6PIV2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.23■■□□□ 1.47
FOXR1Q6PIV2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
FOXR1Q6PIV2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
FOXR1Q6PIV2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.22■■□□□ 1.47
FOXR1Q6PIV2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.22■■□□□ 1.47
FOXR1Q6PIV2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.22■■□□□ 1.47
FOXR1Q6PIV2 AC096887.2-201ENST00000623443 1957 ntBASIC24.22■■□□□ 1.47
FOXR1Q6PIV2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 ECEL1P2-201ENST00000461596 1295 ntBASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.21■■□□□ 1.47
FOXR1Q6PIV2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
FOXR1Q6PIV2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
FOXR1Q6PIV2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.47
FOXR1Q6PIV2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 WHAMMP3-201ENST00000611636 1609 ntBASIC24.2■■□□□ 1.46
FOXR1Q6PIV2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.19■■□□□ 1.46
FOXR1Q6PIV2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.18■■□□□ 1.46
FOXR1Q6PIV2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
FOXR1Q6PIV2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
FOXR1Q6PIV2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
FOXR1Q6PIV2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.18■■□□□ 1.46
FOXR1Q6PIV2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
FOXR1Q6PIV2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.18■■□□□ 1.46
FOXR1Q6PIV2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 AC142472.1-201ENST00000612013 1741 ntBASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.17■■□□□ 1.46
FOXR1Q6PIV2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.16■■□□□ 1.46
FOXR1Q6PIV2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
FOXR1Q6PIV2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
FOXR1Q6PIV2 RARRES2P1-201ENST00000474487 481 ntBASIC24.16■■□□□ 1.46
FOXR1Q6PIV2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.16■■□□□ 1.46
FOXR1Q6PIV2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.16■■□□□ 1.46
FOXR1Q6PIV2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.16■■□□□ 1.46
FOXR1Q6PIV2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
FOXR1Q6PIV2 LINC00565-201ENST00000562710 2331 ntBASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms