Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C11orf88Q6PI97 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
C11orf88Q6PI97 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
C11orf88Q6PI97 GPX1-201ENST00000419349 1106 ntBASIC20.2■□□□□ 0.82
C11orf88Q6PI97 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
C11orf88Q6PI97 RNF126P1-201ENST00000567452 1320 ntBASIC20.2■□□□□ 0.82
C11orf88Q6PI97 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C11orf88Q6PI97 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 RARRES2P2-201ENST00000394842 485 ntBASIC20.19■□□□□ 0.82
C11orf88Q6PI97 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
C11orf88Q6PI97 LINC01124-201ENST00000409786 2117 ntBASIC20.18■□□□□ 0.82
C11orf88Q6PI97 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
C11orf88Q6PI97 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.18■□□□□ 0.82
C11orf88Q6PI97 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C11orf88Q6PI97 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.18■□□□□ 0.82
C11orf88Q6PI97 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
C11orf88Q6PI97 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C11orf88Q6PI97 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.18■□□□□ 0.82
C11orf88Q6PI97 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C11orf88Q6PI97 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C11orf88Q6PI97 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.17■□□□□ 0.82
C11orf88Q6PI97 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.17■□□□□ 0.82
C11orf88Q6PI97 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.17■□□□□ 0.82
C11orf88Q6PI97 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C11orf88Q6PI97 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C11orf88Q6PI97 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
C11orf88Q6PI97 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C11orf88Q6PI97 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf88Q6PI97 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.15■□□□□ 0.82
C11orf88Q6PI97 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.15■□□□□ 0.82
C11orf88Q6PI97 ABHD17AP5-201ENST00000580133 923 ntBASIC20.15■□□□□ 0.82
C11orf88Q6PI97 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf88Q6PI97 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.15■□□□□ 0.82
C11orf88Q6PI97 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf88Q6PI97 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
C11orf88Q6PI97 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C11orf88Q6PI97 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C11orf88Q6PI97 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
C11orf88Q6PI97 AC097639.1-201ENST00000565519 1891 ntBASIC20.13■□□□□ 0.81
C11orf88Q6PI97 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 AC148477.6-201ENST00000623746 465 ntBASIC20.12■□□□□ 0.81
C11orf88Q6PI97 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf88Q6PI97 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 CLDN5-201ENST00000403084 2357 ntBASIC20.11■□□□□ 0.81
C11orf88Q6PI97 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf88Q6PI97 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
C11orf88Q6PI97 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
C11orf88Q6PI97 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.1■□□□□ 0.81
C11orf88Q6PI97 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
C11orf88Q6PI97 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.1■□□□□ 0.81
C11orf88Q6PI97 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
C11orf88Q6PI97 AC022413.1-201ENST00000624602 984 ntBASIC20.1■□□□□ 0.81
C11orf88Q6PI97 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.1■□□□□ 0.81
C11orf88Q6PI97 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
C11orf88Q6PI97 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.09■□□□□ 0.81
C11orf88Q6PI97 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms