Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YPL102CYPL102C 303 nt6.79□□□□□ -1.32
UBP3Q01477 NUR1YDL089W 1455 nt6.79□□□□□ -1.32 RIP-Chip
UBP3Q01477 MIF2YKL089W 1650 nt6.78□□□□□ -1.32
UBP3Q01477 YPR196WYPR196W 1413 nt6.78□□□□□ -1.32
UBP3Q01477 SDH4YDR178W 546 nt6.78□□□□□ -1.32
UBP3Q01477 YGR127WYGR127W 939 nt6.78□□□□□ -1.32
UBP3Q01477 YIP3YNL044W 531 nt6.78□□□□□ -1.32
UBP3Q01477 AMD2YDR242W 1650 nt6.77□□□□□ -1.32 RIP-Chip
UBP3Q01477 BUG1YDL099W 1026 nt6.77□□□□□ -1.33
UBP3Q01477 snR82snR82 268 nt6.77□□□□□ -1.33
UBP3Q01477 ASP1YDR321W 1146 nt6.77□□□□□ -1.33
UBP3Q01477 RRP17YDR412W 708 nt6.77□□□□□ -1.33 RIP-Chip
UBP3Q01477 GAL83YER027C 1254 nt6.77□□□□□ -1.33
UBP3Q01477 ERV14YGL054C 417 nt6.77□□□□□ -1.33
UBP3Q01477 ARP1YHR129C 1155 nt6.77□□□□□ -1.33
UBP3Q01477 EFM3YJR129C 1020 nt6.77□□□□□ -1.33
UBP3Q01477 XPT1YJR133W 630 nt6.77□□□□□ -1.33
UBP3Q01477 YHL045WYHL045W 348 nt6.76□□□□□ -1.33
UBP3Q01477 TDH2YJR009C 999 nt6.76□□□□□ -1.33
UBP3Q01477 CDA2YLR308W 939 nt6.76□□□□□ -1.33
UBP3Q01477 YML018CYML018C 1182 nt6.76□□□□□ -1.33
UBP3Q01477 PFA4YOL003C 1137 nt6.76□□□□□ -1.33
UBP3Q01477 RKI1YOR095C 777 nt6.76□□□□□ -1.33
UBP3Q01477 HAT1YPL001W 1125 nt6.76□□□□□ -1.33
UBP3Q01477 OAZ1YPL052W 879 nt6.76□□□□□ -1.33
UBP3Q01477 CEF1YMR213W 1773 nt6.76□□□□□ -1.33
UBP3Q01477 IML2YJL082W 2196 nt6.76□□□□□ -1.33
UBP3Q01477 CYC8YBR112C 2901 nt6.75□□□□□ -1.33
UBP3Q01477 YEL050W-AYEL050W-A 192 nt6.75□□□□□ -1.33
UBP3Q01477 YEL075W-AYEL075W-A 612 nt6.75□□□□□ -1.33
UBP3Q01477 MRP13YGR084C 1020 nt6.75□□□□□ -1.33
UBP3Q01477 YKL031WYKL031W 414 nt6.75□□□□□ -1.33
UBP3Q01477 VPS24YKL041W 675 nt6.75□□□□□ -1.33
UBP3Q01477 YLR463CYLR463C 552 nt6.75□□□□□ -1.33
UBP3Q01477 GTR1YML121W 933 nt6.75□□□□□ -1.33 RIP-Chip
UBP3Q01477 YOR292CYOR292C 930 nt6.75□□□□□ -1.33
UBP3Q01477 YPL113CYPL113C 1191 nt6.75□□□□□ -1.33
UBP3Q01477 RRP9YPR137W 1722 nt6.75□□□□□ -1.33 RIP-Chip
UBP3Q01477 ALT2YDR111C 1524 nt6.75□□□□□ -1.33
UBP3Q01477 YIL055CYIL055C 1884 nt6.75□□□□□ -1.33 RIP-Chip
UBP3Q01477 TRP5YGL026C 2124 nt6.74□□□□□ -1.33
UBP3Q01477 RAD59YDL059C 717 nt6.74□□□□□ -1.33
UBP3Q01477 QCR8YJL166W 285 nt6.74□□□□□ -1.33
UBP3Q01477 YJL215CYJL215C 360 nt6.74□□□□□ -1.33
UBP3Q01477 YLR184WYLR184W 348 nt6.74□□□□□ -1.33
UBP3Q01477 SEC17YBL050W 879 nt6.74□□□□□ -1.33 RIP-Chip
UBP3Q01477 ATG19YOL082W 1248 nt6.74□□□□□ -1.33 RIP-Chip
UBP3Q01477 YBR089WYBR089W 600 nt6.74□□□□□ -1.33
UBP3Q01477 DBP9YLR276C 1785 nt6.74□□□□□ -1.33
UBP3Q01477 GUP2YPL189W 1830 nt6.73□□□□□ -1.33 RIP-Chip
UBP3Q01477 PFA5YDR459C 1125 nt6.73□□□□□ -1.33
UBP3Q01477 YER134CYER134C 537 nt6.73□□□□□ -1.33
UBP3Q01477 ADH4YGL256W 1149 nt6.73□□□□□ -1.33
UBP3Q01477 TFG2YGR005C 1203 nt6.73□□□□□ -1.33
UBP3Q01477 THI4YGR144W 981 nt6.73□□□□□ -1.33 RIP-Chip
UBP3Q01477 CTR2YHR175W 570 nt6.73□□□□□ -1.33
UBP3Q01477 YKL169CYKL169C 384 nt6.73□□□□□ -1.33
UBP3Q01477 ARG8YOL140W 1272 nt6.73□□□□□ -1.33
UBP3Q01477 KTR1YOR099W 1182 nt6.73□□□□□ -1.33
UBP3Q01477 RVB2YPL235W 1416 nt6.73□□□□□ -1.33
UBP3Q01477 EFT2YDR385W 2529 nt6.73□□□□□ -1.33
UBP3Q01477 EFT1YOR133W 2529 nt6.73□□□□□ -1.33
UBP3Q01477 HRQ1YDR291W 3234 nt6.72□□□□□ -1.33
UBP3Q01477 MRPL32YCR003W 552 nt6.72□□□□□ -1.33
UBP3Q01477 GET3YDL100C 1065 nt6.72□□□□□ -1.33
UBP3Q01477 UBC6YER100W 753 nt6.72□□□□□ -1.33 RIP-Chip
UBP3Q01477 TMT1YER175C 900 nt6.72□□□□□ -1.33
UBP3Q01477 SEC28YIL076W 891 nt6.72□□□□□ -1.33
UBP3Q01477 LCB3YJL134W 1230 nt6.72□□□□□ -1.33
UBP3Q01477 GPI2YPL076W 843 nt6.72□□□□□ -1.33
UBP3Q01477 VPS36YLR417W 1701 nt6.72□□□□□ -1.33
UBP3Q01477 CMK1YFR014C 1341 nt6.72□□□□□ -1.33
UBP3Q01477 PRY3YJL078C 2646 nt6.71□□□□□ -1.33 RIP-Chip
UBP3Q01477 SMF3YLR034C 1422 nt6.71□□□□□ -1.34 RIP-Chip
UBP3Q01477 INO2YDR123C 915 nt6.71□□□□□ -1.34
UBP3Q01477 YDR222WYDR222W 1248 nt6.71□□□□□ -1.34 RIP-Chip
UBP3Q01477 YHL018WYHL018W 363 nt6.71□□□□□ -1.34
UBP3Q01477 IPI1YHR085W 1005 nt6.71□□□□□ -1.34 RIP-Chip
UBP3Q01477 PSR1YLL010C 1284 nt6.71□□□□□ -1.34 RIP-Chip
UBP3Q01477 MID2YLR332W 1131 nt6.71□□□□□ -1.34
UBP3Q01477 RPS3YNL178W 723 nt6.71□□□□□ -1.34
UBP3Q01477 YDC1YPL087W 954 nt6.71□□□□□ -1.34
UBP3Q01477 RBA50YDR527W 1320 nt6.71□□□□□ -1.34
UBP3Q01477 DIN7YDR263C 1293 nt6.7□□□□□ -1.34 RIP-Chip
UBP3Q01477 YGL262WYGL262W 528 nt6.7□□□□□ -1.34
UBP3Q01477 PSR2YLR019W 1194 nt6.7□□□□□ -1.34
UBP3Q01477 IMD1YAR073W 1212 nt6.7□□□□□ -1.34
UBP3Q01477 YMR295CYMR295C 594 nt6.7□□□□□ -1.34
UBP3Q01477 IES2YNL215W 963 nt6.7□□□□□ -1.34
UBP3Q01477 STE12YHR084W 2067 nt6.7□□□□□ -1.34
UBP3Q01477 PRT1YOR361C 2292 nt6.7□□□□□ -1.34 RIP-Chip
UBP3Q01477 ACS1YAL054C 2142 nt6.7□□□□□ -1.34
UBP3Q01477 SET5YHR207C 1581 nt6.69□□□□□ -1.34
UBP3Q01477 UBX2YML013W 1755 nt6.69□□□□□ -1.34
UBP3Q01477 FHL1YPR104C 2811 nt6.69□□□□□ -1.34 RIP-Chip
UBP3Q01477 MET7YOR241W 1647 nt6.69□□□□□ -1.34 RIP-Chip
UBP3Q01477 MCH1YDL054C 1461 nt6.69□□□□□ -1.34
UBP3Q01477 NVJ1YHR195W 966 nt6.69□□□□□ -1.34
UBP3Q01477 YIL086CYIL086C 309 nt6.69□□□□□ -1.34
UBP3Q01477 YIR042CYIR042C 711 nt6.69□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 128.8 ms