Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 CAD1YDR423C 1230 nt5.86□□□□□ -1.47
RPA49Q01080 PGU1YJR153W 1086 nt5.86□□□□□ -1.47
RPA49Q01080 TFS1YLR178C 660 nt5.86□□□□□ -1.47
RPA49Q01080 SSK1YLR006C 2139 nt5.86□□□□□ -1.47
RPA49Q01080 EFT2YDR385W 2529 nt5.85□□□□□ -1.47
RPA49Q01080 EFT1YOR133W 2529 nt5.85□□□□□ -1.47
RPA49Q01080 RDL1YOR285W 420 nt5.85□□□□□ -1.47
RPA49Q01080 ARO7YPR060C 771 nt5.85□□□□□ -1.47
RPA49Q01080 YAP1801YHR161C 1914 nt5.85□□□□□ -1.47
RPA49Q01080 DDC1YPL194W 1839 nt5.85□□□□□ -1.47
RPA49Q01080 HAS1YMR290C 1518 nt5.84□□□□□ -1.47
RPA49Q01080 MTC5YDR128W 3447 nt5.84□□□□□ -1.47
RPA49Q01080 COS9YKL219W 1224 nt5.84□□□□□ -1.47
RPA49Q01080 YOL097W-AYOL097W-A 186 nt5.84□□□□□ -1.47
RPA49Q01080 ECM2YBR065C 1095 nt5.84□□□□□ -1.47
RPA49Q01080 UTP7YER082C 1665 nt5.84□□□□□ -1.47
RPA49Q01080 SSK22YCR073C 3996 nt5.83□□□□□ -1.48
RPA49Q01080 ENT2YLR206W 1842 nt5.83□□□□□ -1.48
RPA49Q01080 RTT106YNL206C 1368 nt5.83□□□□□ -1.48
RPA49Q01080 ASN1YPR145W 1719 nt5.83□□□□□ -1.48
RPA49Q01080 ARP2YDL029W 1176 nt5.83□□□□□ -1.48
RPA49Q01080 YGL072CYGL072C 360 nt5.83□□□□□ -1.48
RPA49Q01080 YNR048WYNR048W 1182 nt5.83□□□□□ -1.48
RPA49Q01080 YPR195CYPR195C 330 nt5.83□□□□□ -1.48
RPA49Q01080 RSA4YCR072C 1548 nt5.83□□□□□ -1.48
RPA49Q01080 YMR155WYMR155W 1644 nt5.82□□□□□ -1.48
RPA49Q01080 PTK2YJR059W 2457 nt5.82□□□□□ -1.48
RPA49Q01080 VMS1YDR049W 1899 nt5.82□□□□□ -1.48
RPA49Q01080 SNF11YDR073W 510 nt5.82□□□□□ -1.48
RPA49Q01080 YJR115WYJR115W 510 nt5.82□□□□□ -1.48
RPA49Q01080 BAP2YBR068C 1830 nt5.82□□□□□ -1.48
RPA49Q01080 AMA1YGR225W 1782 nt5.81□□□□□ -1.48
RPA49Q01080 ALT1YLR089C 1779 nt5.81□□□□□ -1.48
RPA49Q01080 SFC1YJR095W 969 nt5.81□□□□□ -1.48
RPA49Q01080 MRPL13YKR006C 795 nt5.81□□□□□ -1.48
RPA49Q01080 PIF1YML061C 2580 nt5.81□□□□□ -1.48
RPA49Q01080 PRP40YKL012W 1752 nt5.8□□□□□ -1.48
RPA49Q01080 YHR045WYHR045W 1683 nt5.8□□□□□ -1.48
RPA49Q01080 SIP2YGL208W 1248 nt5.8□□□□□ -1.48
RPA49Q01080 SYN8YAL014C 768 nt5.8□□□□□ -1.48
RPA49Q01080 RPT1YKL145W 1404 nt5.8□□□□□ -1.48
RPA49Q01080 ACF2YLR144C 2340 nt5.8□□□□□ -1.48
RPA49Q01080 YGL036WYGL036W 2730 nt5.79□□□□□ -1.48
RPA49Q01080 SNT2YGL131C 4212 nt5.79□□□□□ -1.48
RPA49Q01080 MTQ2YDR140W 666 nt5.79□□□□□ -1.48
RPA49Q01080 COS6YGR295C 1146 nt5.79□□□□□ -1.48
RPA49Q01080 UBC4YBR082C 447 nt5.79□□□□□ -1.48
RPA49Q01080 UTP18YJL069C 1785 nt5.79□□□□□ -1.48
RPA49Q01080 KTR5YNL029C 1569 nt5.79□□□□□ -1.48
RPA49Q01080 GEP3YOR205C 1671 nt5.79□□□□□ -1.48
RPA49Q01080 EAF5YEL018W 840 nt5.78□□□□□ -1.48
RPA49Q01080 SCW4YGR279C 1161 nt5.78□□□□□ -1.48
RPA49Q01080 TIM54YJL054W 1437 nt5.78□□□□□ -1.48
RPA49Q01080 YLR118CYLR118C 684 nt5.78□□□□□ -1.48
RPA49Q01080 YLR194CYLR194C 765 nt5.78□□□□□ -1.48
RPA49Q01080 PSH1YOL054W 1221 nt5.78□□□□□ -1.48
RPA49Q01080 CBC2YPL178W 627 nt5.78□□□□□ -1.48
RPA49Q01080 HAL1YPR005C 885 nt5.78□□□□□ -1.48
RPA49Q01080 ALT2YDR111C 1524 nt5.78□□□□□ -1.48
RPA49Q01080 IMA2YOL157C 1770 nt5.78□□□□□ -1.48
RPA49Q01080 HXK2YGL253W 1461 nt5.77□□□□□ -1.49
RPA49Q01080 GEX1YCL073C 1848 nt5.77□□□□□ -1.49
RPA49Q01080 GEX2YKR106W 1848 nt5.77□□□□□ -1.49
RPA49Q01080 YKL151CYKL151C 1014 nt5.77□□□□□ -1.49
RPA49Q01080 YKR073CYKR073C 321 nt5.77□□□□□ -1.49
RPA49Q01080 TAF11YML015C 1041 nt5.77□□□□□ -1.49
RPA49Q01080 RCK1YGL158W 1539 nt5.77□□□□□ -1.49
RPA49Q01080 MKC7YDR144C 1791 nt5.76□□□□□ -1.49
RPA49Q01080 POP1YNL221C 2628 nt5.76□□□□□ -1.49
RPA49Q01080 YDR541CYDR541C 1035 nt5.76□□□□□ -1.49
RPA49Q01080 CAR1YPL111W 1002 nt5.76□□□□□ -1.49
RPA49Q01080 RRT2YBR246W 1164 nt5.76□□□□□ -1.49
RPA49Q01080 GPT2YKR067W 2232 nt5.76□□□□□ -1.49
RPA49Q01080 TAX4YJL083W 1815 nt5.76□□□□□ -1.49
RPA49Q01080 PTR2YKR093W 1806 nt5.76□□□□□ -1.49
RPA49Q01080 DED81YHR019C 1665 nt5.75□□□□□ -1.49
RPA49Q01080 TRP5YGL026C 2124 nt5.75□□□□□ -1.49
RPA49Q01080 SEC12YNR026C 1416 nt5.75□□□□□ -1.49
RPA49Q01080 ALD6YPL061W 1503 nt5.75□□□□□ -1.49
RPA49Q01080 UTP9YHR196W 1728 nt5.75□□□□□ -1.49
RPA49Q01080 ADK2YER170W 678 nt5.75□□□□□ -1.49
RPA49Q01080 MLC1YGL106W 450 nt5.75□□□□□ -1.49
RPA49Q01080 MTQ1YNL063W 945 nt5.75□□□□□ -1.49
RPA49Q01080 KTR3YBR205W 1215 nt5.75□□□□□ -1.49
RPA49Q01080 LDB19YOR322C 2457 nt5.75□□□□□ -1.49
RPA49Q01080 PRO3YER023W 861 nt5.74□□□□□ -1.49
RPA49Q01080 DOM34YNL001W 1161 nt5.74□□□□□ -1.49
RPA49Q01080 RHO2YNL090W 579 nt5.74□□□□□ -1.49
RPA49Q01080 CDS1YBR029C 1374 nt5.74□□□□□ -1.49
RPA49Q01080 SOG2YOR353C 2376 nt5.73□□□□□ -1.49
RPA49Q01080 KNH1YDL049C 807 nt5.73□□□□□ -1.49
RPA49Q01080 SLO1YER180C-A 258 nt5.73□□□□□ -1.49
RPA49Q01080 YGR127WYGR127W 939 nt5.73□□□□□ -1.49
RPA49Q01080 YIL060WYIL060W 435 nt5.73□□□□□ -1.49
RPA49Q01080 YML131WYML131W 1098 nt5.73□□□□□ -1.49
RPA49Q01080 YNL194CYNL194C 906 nt5.73□□□□□ -1.49
RPA49Q01080 YPR098CYPR098C 486 nt5.73□□□□□ -1.49
RPA49Q01080 TEA1YOR337W 2280 nt5.73□□□□□ -1.49
RPA49Q01080 TBF1YPL128C 1689 nt5.72□□□□□ -1.49
RPA49Q01080 RET1YOR207C 3450 nt5.72□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms