Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIPPLY3P57055 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.47■□□□□ 0.71
RIPPLY3P57055 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPPLY3P57055 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIPPLY3P57055 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.46■□□□□ 0.71
RIPPLY3P57055 CD99P1-205ENST00000527459 561 ntBASIC19.46■□□□□ 0.71
RIPPLY3P57055 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RIPPLY3P57055 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RIPPLY3P57055 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPPLY3P57055 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIPPLY3P57055 ABCB10P3-201ENST00000561950 2166 ntBASIC19.46■□□□□ 0.71
RIPPLY3P57055 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPPLY3P57055 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIPPLY3P57055 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPPLY3P57055 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPPLY3P57055 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPPLY3P57055 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPPLY3P57055 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPPLY3P57055 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.45■□□□□ 0.7
RIPPLY3P57055 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPPLY3P57055 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RIPPLY3P57055 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPPLY3P57055 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPPLY3P57055 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPPLY3P57055 YBX1P1-201ENST00000445822 960 ntBASIC19.44■□□□□ 0.7
RIPPLY3P57055 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPPLY3P57055 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPPLY3P57055 MIR4767-201ENST00000582827 78 ntBASIC19.44■□□□□ 0.7
RIPPLY3P57055 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPPLY3P57055 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPPLY3P57055 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPPLY3P57055 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RIPPLY3P57055 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPPLY3P57055 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.43■□□□□ 0.7
RIPPLY3P57055 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.43■□□□□ 0.7
RIPPLY3P57055 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPPLY3P57055 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPPLY3P57055 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPPLY3P57055 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPPLY3P57055 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPPLY3P57055 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPPLY3P57055 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPPLY3P57055 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPPLY3P57055 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIPPLY3P57055 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RIPPLY3P57055 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPPLY3P57055 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPPLY3P57055 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPPLY3P57055 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPPLY3P57055 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIPPLY3P57055 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RIPPLY3P57055 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIPPLY3P57055 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.41■□□□□ 0.7
RIPPLY3P57055 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.41■□□□□ 0.7
RIPPLY3P57055 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPPLY3P57055 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPPLY3P57055 TSPY20P-201ENST00000450910 630 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 DUX4L2-201ENST00000561772 1275 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
RIPPLY3P57055 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RIPPLY3P57055 DUX4L6-201ENST00000626483 1275 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 DUX4L1-201ENST00000627662 1275 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 DUX4L8-201ENST00000629013 1275 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 DUX4L3-201ENST00000630187 1275 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 DUX4L7-201ENST00000630678 1275 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 DUX4L5-201ENST00000630834 1275 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIPPLY3P57055 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIPPLY3P57055 WHAMMP3-201ENST00000611636 1609 ntBASIC19.4■□□□□ 0.7
RIPPLY3P57055 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPPLY3P57055 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPPLY3P57055 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIPPLY3P57055 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPPLY3P57055 AL355802.2-201ENST00000402069 882 ntBASIC19.39■□□□□ 0.69
RIPPLY3P57055 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.39■□□□□ 0.69
RIPPLY3P57055 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.39■□□□□ 0.69
RIPPLY3P57055 AC104771.1-201ENST00000603335 964 ntBASIC19.39■□□□□ 0.69
RIPPLY3P57055 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPPLY3P57055 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPPLY3P57055 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPPLY3P57055 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.39■□□□□ 0.69
RIPPLY3P57055 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPPLY3P57055 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPPLY3P57055 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RIPPLY3P57055 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPPLY3P57055 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPPLY3P57055 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.38■□□□□ 0.69
RIPPLY3P57055 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPPLY3P57055 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
RIPPLY3P57055 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPPLY3P57055 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms