Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.35■■□□□ 1.33
HTR1BP28222 FOXO3B-201ENST00000395675 1928 ntBASIC23.35■■□□□ 1.33
HTR1BP28222 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HTR1BP28222 AC097639.1-201ENST00000565519 1891 ntBASIC23.34■■□□□ 1.33
HTR1BP28222 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HTR1BP28222 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HTR1BP28222 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HTR1BP28222 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.34■■□□□ 1.33
HTR1BP28222 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HTR1BP28222 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.34■■□□□ 1.33
HTR1BP28222 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HTR1BP28222 AC010501.1-201ENST00000606270 1962 ntBASIC23.34■■□□□ 1.33
HTR1BP28222 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HTR1BP28222 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HTR1BP28222 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HTR1BP28222 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
HTR1BP28222 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.33■■□□□ 1.33
HTR1BP28222 MIR4281-201ENST00000580852 62 ntBASIC23.33■■□□□ 1.33
HTR1BP28222 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.33■■□□□ 1.33
HTR1BP28222 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.33■■□□□ 1.33
HTR1BP28222 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
HTR1BP28222 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
HTR1BP28222 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
HTR1BP28222 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.33■■□□□ 1.32
HTR1BP28222 AC096887.2-201ENST00000623443 1957 ntBASIC23.32■■□□□ 1.32
HTR1BP28222 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.32■■□□□ 1.32
HTR1BP28222 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.32■■□□□ 1.32
HTR1BP28222 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.32■■□□□ 1.32
HTR1BP28222 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.32■■□□□ 1.32
HTR1BP28222 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HTR1BP28222 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HTR1BP28222 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTR1BP28222 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTR1BP28222 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.31■■□□□ 1.32
HTR1BP28222 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
HTR1BP28222 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.31■■□□□ 1.32
HTR1BP28222 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.31■■□□□ 1.32
HTR1BP28222 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
HTR1BP28222 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.31■■□□□ 1.32
HTR1BP28222 AL356441.2-201ENST00000443009 864 ntBASIC23.31■■□□□ 1.32
HTR1BP28222 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.31■■□□□ 1.32
HTR1BP28222 AC131212.1-201ENST00000613771 668 ntBASIC23.31■■□□□ 1.32
HTR1BP28222 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTR1BP28222 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HTR1BP28222 AC092803.2-201ENST00000564287 1899 ntBASIC23.3■■□□□ 1.32
HTR1BP28222 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTR1BP28222 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
HTR1BP28222 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.3■■□□□ 1.32
HTR1BP28222 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HTR1BP28222 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.3■■□□□ 1.32
HTR1BP28222 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTR1BP28222 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTR1BP28222 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR1BP28222 AC021242.3-201ENST00000607598 1377 ntBASIC23.29■■□□□ 1.32
HTR1BP28222 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR1BP28222 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
HTR1BP28222 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR1BP28222 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HTR1BP28222 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
HTR1BP28222 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.28■■□□□ 1.32
HTR1BP28222 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.28■■□□□ 1.32
HTR1BP28222 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
HTR1BP28222 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.28■■□□□ 1.32
HTR1BP28222 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTR1BP28222 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTR1BP28222 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
HTR1BP28222 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTR1BP28222 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.27■■□□□ 1.32
HTR1BP28222 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.27■■□□□ 1.32
HTR1BP28222 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTR1BP28222 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTR1BP28222 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.27■■□□□ 1.31
HTR1BP28222 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTR1BP28222 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTR1BP28222 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTR1BP28222 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTR1BP28222 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTR1BP28222 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
HTR1BP28222 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.26■■□□□ 1.31
HTR1BP28222 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTR1BP28222 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.26■■□□□ 1.31
HTR1BP28222 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.25■■□□□ 1.31
HTR1BP28222 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.25■■□□□ 1.31
HTR1BP28222 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.25■■□□□ 1.31
HTR1BP28222 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.25■■□□□ 1.31
HTR1BP28222 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.25■■□□□ 1.31
HTR1BP28222 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
HTR1BP28222 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTR1BP28222 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTR1BP28222 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
HTR1BP28222 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HTR1BP28222 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTR1BP28222 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.24■■□□□ 1.31
HTR1BP28222 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.24■■□□□ 1.31
HTR1BP28222 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.24■■□□□ 1.31
HTR1BP28222 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.24■■□□□ 1.31
HTR1BP28222 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HTR1BP28222 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTR1BP28222 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.24■■□□□ 1.31
HTR1BP28222 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms