Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.73■□□□□ 0.75
CD74P04233 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD74P04233 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CD74P04233 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CD74P04233 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.72■□□□□ 0.75
CD74P04233 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.72■□□□□ 0.75
CD74P04233 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.72■□□□□ 0.75
CD74P04233 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD74P04233 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD74P04233 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CD74P04233 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.71■□□□□ 0.75
CD74P04233 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD74P04233 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD74P04233 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.71■□□□□ 0.75
CD74P04233 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD74P04233 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.71■□□□□ 0.75
CD74P04233 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.71■□□□□ 0.75
CD74P04233 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD74P04233 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.71■□□□□ 0.75
CD74P04233 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CD74P04233 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD74P04233 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD74P04233 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD74P04233 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD74P04233 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD74P04233 AL162393.1-201ENST00000437852 946 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L13-201ENST00000554103 1267 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L15-201ENST00000611059 1267 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L23-201ENST00000615195 1269 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L24-201ENST00000617576 1269 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L22-201ENST00000618238 1269 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L20-201ENST00000619712 1269 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L21-201ENST00000622058 1269 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L10-201ENST00000622460 1267 ntBASIC19.7■□□□□ 0.74
CD74P04233 DUX4L25-201ENST00000624915 1269 ntBASIC19.7■□□□□ 0.74
CD74P04233 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CD74P04233 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.7■□□□□ 0.74
CD74P04233 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD74P04233 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD74P04233 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD74P04233 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.7■□□□□ 0.74
CD74P04233 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD74P04233 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CD74P04233 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD74P04233 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CD74P04233 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.69■□□□□ 0.74
CD74P04233 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD74P04233 LINC01971-201ENST00000617888 1048 ntBASIC19.69■□□□□ 0.74
CD74P04233 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CD74P04233 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD74P04233 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.68■□□□□ 0.74
CD74P04233 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD74P04233 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD74P04233 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD74P04233 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD74P04233 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD74P04233 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.68■□□□□ 0.74
CD74P04233 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD74P04233 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD74P04233 HLA-L-211ENST00000482052 1765 ntBASIC19.67■□□□□ 0.74
CD74P04233 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD74P04233 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD74P04233 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD74P04233 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD74P04233 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD74P04233 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.67■□□□□ 0.74
CD74P04233 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.67■□□□□ 0.74
CD74P04233 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CD74P04233 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD74P04233 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD74P04233 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD74P04233 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD74P04233 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD74P04233 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD74P04233 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD74P04233 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CD74P04233 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CD74P04233 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD74P04233 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CD74P04233 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CD74P04233 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CD74P04233 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD74P04233 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.65■□□□□ 0.74
CD74P04233 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD74P04233 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CD74P04233 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.65■□□□□ 0.74
CD74P04233 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD74P04233 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
CD74P04233 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms