Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 TPM4-205ENST00000586833 558 ntTSL 516.21■□□□□ 0.193e-8■■■□□ 18
NKRFO15226 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.123e-8■■■□□ 18
NKRFO15226 TPM4-210ENST00000588507 367 ntTSL 38.41□□□□□ -1.063e-8■■■□□ 18
NKRFO15226 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.77■□□□□ 0.433e-6■■■□□ 18
NKRFO15226 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.43e-6■■■□□ 18
NKRFO15226 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.82■□□□□ 0.283e-6■■■□□ 18
NKRFO15226 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.58■□□□□ 0.093e-6■■■□□ 18
NKRFO15226 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC10.33□□□□□ -0.763e-6■■■□□ 18
NKRFO15226 PPP3CA-209ENST00000529324 579 ntTSL 37.96□□□□□ -1.143e-6■■■□□ 18
NKRFO15226 PPP3CA-208ENST00000525819 569 ntTSL 43.8□□□□□ -1.83e-6■■■□□ 18
NKRFO15226 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.422e-6■■■□□ 18
NKRFO15226 TAF4-203ENST00000474089 532 ntTSL 222.7■■□□□ 1.222e-6■■■□□ 18
NKRFO15226 TAF4-202ENST00000436129 2440 ntTSL 217.01■□□□□ 0.312e-6■■■□□ 18
NKRFO15226 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.692e-7■■■□□ 18
NKRFO15226 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.962e-7■■■□□ 18
NKRFO15226 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.172e-7■■■□□ 18
NKRFO15226 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.072e-7■■■□□ 18
NKRFO15226 ZBTB10-201ENST00000379091 2181 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.682e-7■■■□□ 18
NKRFO15226 HPCAL1-205ENST00000423674 586 ntTSL 426.54■■□□□ 1.848e-7■■■□□ 17.9
NKRFO15226 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.38e-7■■■□□ 17.9
NKRFO15226 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.161e-6■■■□□ 17.9
NKRFO15226 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.291e-6■■■□□ 17.9
NKRFO15226 AC073111.4-201ENST00000483664 582 ntTSL 415.11■□□□□ 0.011e-6■■■□□ 17.9
NKRFO15226 DLGAP4-AS1-201ENST00000425233 443 ntTSL 518.09■□□□□ 0.491e-6■■■□□ 17.9
NKRFO15226 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.93□□□□□ -0.021e-6■■■□□ 17.9
NKRFO15226 AATK-206ENST00000572798 407 ntTSL 214.83□□□□□ -0.041e-6■■■□□ 17.9
NKRFO15226 FOXP4-206ENST00000451305 367 ntTSL 1 (best)19.73■□□□□ 0.753e-6■■■□□ 17.9
NKRFO15226 ARHGEF2-217ENST00000497907 764 ntTSL 322.59■■□□□ 1.212e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-216ENST00000495070 571 ntTSL 419.36■□□□□ 0.692e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-213ENST00000476273 668 ntTSL 316.19■□□□□ 0.182e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.052e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.262e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.4□□□□□ -0.272e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-211ENST00000471589 892 ntTSL 513.07□□□□□ -0.322e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-207ENST00000465079 693 ntTSL 212.72□□□□□ -0.372e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC12.49□□□□□ -0.412e-7■■■□□ 17.9
NKRFO15226 ARHGEF2-214ENST00000477754 883 ntTSL 56.54□□□□□ -1.362e-7■■■□□ 17.9
NKRFO15226 ACSL4-209ENST00000505075 390 ntTSL 35.89□□□□□ -1.471e-9■■■□□ 17.9
NKRFO15226 CEP68-203ENST00000475851 550 ntTSL 421.74■■□□□ 1.073e-6■■■□□ 17.9
NKRFO15226 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.153e-6■■■□□ 17.9
NKRFO15226 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.353e-6■■■□□ 17.9
NKRFO15226 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.843e-6■■■□□ 17.9
NKRFO15226 SEMA7A-204ENST00000567345 674 ntTSL 423.03■■□□□ 1.285e-6■■■□□ 17.8
NKRFO15226 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.08■□□□□ 0.975e-6■■■□□ 17.8
NKRFO15226 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.335e-6■■■□□ 17.8
NKRFO15226 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.81■□□□□ 0.125e-6■■■□□ 17.8
NKRFO15226 ZEB1-214ENST00000558863 1355 ntTSL 527.8■■■□□ 2.045e-7■■■□□ 17.8
NKRFO15226 ZEB1-222ENST00000561212 1500 ntTSL 58.16□□□□□ -1.15e-7■■■□□ 17.8
NKRFO15226 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.98■■□□□ 1.432e-7■■■□□ 17.8
NKRFO15226 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC13.21□□□□□ -0.292e-7■■■□□ 17.8
NKRFO15226 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC12.78□□□□□ -0.362e-7■■■□□ 17.8
NKRFO15226 GSE1-216ENST00000637419 2683 ntTSL 522.43■■□□□ 1.181e-6■■■□□ 17.8
NKRFO15226 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.98■■□□□ 1.111e-6■■■□□ 17.8
NKRFO15226 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.9□□□□□ -0.021e-6■■■□□ 17.8
NKRFO15226 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.291e-6■■■□□ 17.8
NKRFO15226 FAM171A1-202ENST00000455654 605 ntTSL 319.44■□□□□ 0.72e-6■■■□□ 17.8
NKRFO15226 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.682e-6■■■□□ 17.8
NKRFO15226 ADARB1-207ENST00000460734 2523 ntTSL 1 (best)27.94■■■□□ 2.069e-7■■■□□ 17.8
NKRFO15226 SLC22A31-205ENST00000603735 791 ntTSL 319.75■□□□□ 0.754e-12■■■□□ 17.8
NKRFO15226 PRMT1-204ENST00000525616 780 ntTSL 225.69■■□□□ 1.73e-6■■■□□ 17.8
NKRFO15226 PRMT1-220ENST00000534676 915 ntTSL 222.24■■□□□ 1.153e-6■■■□□ 17.8
NKRFO15226 PRMT1-218ENST00000534280 766 ntTSL 321.72■■□□□ 1.073e-6■■■□□ 17.8
NKRFO15226 PRMT1-203ENST00000524771 713 ntTSL 318.81■□□□□ 0.63e-6■■■□□ 17.8
NKRFO15226 PRMT1-214ENST00000529836 580 ntTSL 317.71■□□□□ 0.433e-6■■■□□ 17.8
NKRFO15226 PRMT1-219ENST00000534465 779 ntTSL 314.79□□□□□ -0.043e-6■■■□□ 17.8
NKRFO15226 PRMT1-207ENST00000527382 699 ntTSL 314.79□□□□□ -0.043e-6■■■□□ 17.8
NKRFO15226 PRMT1-211ENST00000528623 543 ntTSL 314.67□□□□□ -0.063e-6■■■□□ 17.8
NKRFO15226 PRMT1-212ENST00000529284 1182 ntTSL 513.16□□□□□ -0.33e-6■■■□□ 17.8
NKRFO15226 PRMT1-205ENST00000525915 298 ntTSL 35.31□□□□□ -1.563e-6■■■□□ 17.8
NKRFO15226 AGRN-205ENST00000469403 899 ntTSL 330■■■□□ 2.393e-7■■■□□ 17.8
NKRFO15226 AGRN-206ENST00000477585 707 ntTSL 328.02■■■□□ 2.083e-7■■■□□ 17.8
NKRFO15226 PEG10-204ENST00000493935 763 ntTSL 414.18□□□□□ -0.146e-8■■■□□ 17.7
NKRFO15226 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC9.8□□□□□ -0.846e-8■■■□□ 17.7
NKRFO15226 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.936e-8■■■□□ 17.7
NKRFO15226 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.936e-8■■■□□ 17.7
NKRFO15226 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.53□□□□□ -1.046e-8■■■□□ 17.7
NKRFO15226 THUMPD3-AS1-206ENST00000489616 583 ntTSL 218.82■□□□□ 0.62e-14■■■□□ 17.7
NKRFO15226 THUMPD3-AS1-208ENST00000498199 511 ntTSL 218.67■□□□□ 0.582e-14■■■□□ 17.7
NKRFO15226 THUMPD3-AS1-213ENST00000520629 415 ntTSL 318.56■□□□□ 0.562e-14■■■□□ 17.7
NKRFO15226 THUMPD3-AS1-214ENST00000521267 851 ntTSL 35.12□□□□□ -1.592e-14■■■□□ 17.7
NKRFO15226 THUMPD3-AS1-211ENST00000520396 550 ntTSL 35.12□□□□□ -1.592e-14■■■□□ 17.7
NKRFO15226 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.914e-6■■■□□ 17.7
NKRFO15226 SEPT9-223ENST00000589140 552 ntTSL 422.88■■□□□ 1.257e-6■■■□□ 17.7
NKRFO15226 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.124e-6■■■□□ 17.7
NKRFO15226 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.224e-6■■■□□ 17.7
NKRFO15226 FLNA-206ENST00000420627 8225 ntTSL 513.36□□□□□ -0.274e-6■■■□□ 17.7
NKRFO15226 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.354e-6■■■□□ 17.7
NKRFO15226 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.374e-6■■■□□ 17.7
NKRFO15226 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.464e-6■■■□□ 17.7
NKRFO15226 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.79□□□□□ -0.524e-6■■■□□ 17.7
NKRFO15226 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.79e-7■■■□□ 17.7
NKRFO15226 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.41■□□□□ 0.79e-7■■■□□ 17.7
NKRFO15226 HDAC4-216ENST00000544989 342 ntTSL 513.7□□□□□ -0.229e-7■■■□□ 17.7
NKRFO15226 HDAC4-210ENST00000493582 3188 ntTSL 1 (best)12.99□□□□□ -0.339e-7■■■□□ 17.7
NKRFO15226 PRR5-208ENST00000455389 1431 ntTSL 320.7■□□□□ 0.92e-6■■■□□ 17.7
NKRFO15226 PRR5-215ENST00000495017 2125 ntTSL 1 (best)16.88■□□□□ 0.292e-6■■■□□ 17.7
NKRFO15226 MYADM-207ENST00000421337 1009 ntTSL 220.6■□□□□ 0.897e-10■■■□□ 17.7
NKRFO15226 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.217e-10■■■□□ 17.7
NKRFO15226 MYADM-208ENST00000439000 841 ntTSL 316.13■□□□□ 0.177e-10■■■□□ 17.7
NKRFO15226 MYADM-209ENST00000448420 777 ntTSL 215.95■□□□□ 0.147e-10■■■□□ 17.7
Retrieved 100 of 9,198 protein–RNA pairs in 41.4 ms