Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.56■■□□□ 1.68
SOX1O00570 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.56■■□□□ 1.68
SOX1O00570 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SOX1O00570 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SOX1O00570 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SOX1O00570 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.55■■□□□ 1.68
SOX1O00570 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.55■■□□□ 1.68
SOX1O00570 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.55■■□□□ 1.68
SOX1O00570 SNX5-217ENST00000606557 1087 ntBASIC25.55■■□□□ 1.68
SOX1O00570 MIR6722-201ENST00000617286 78 ntBASIC25.55■■□□□ 1.68
SOX1O00570 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SOX1O00570 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.54■■□□□ 1.68
SOX1O00570 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.54■■□□□ 1.68
SOX1O00570 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.54■■□□□ 1.68
SOX1O00570 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.54■■□□□ 1.68
SOX1O00570 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.54■■□□□ 1.68
SOX1O00570 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.54■■□□□ 1.68
SOX1O00570 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SOX1O00570 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SOX1O00570 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SOX1O00570 SYT6-210ENST00000641643 1587 ntBASIC25.53■■□□□ 1.68
SOX1O00570 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SOX1O00570 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SOX1O00570 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SOX1O00570 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.53■■□□□ 1.68
SOX1O00570 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.53■■□□□ 1.68
SOX1O00570 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SOX1O00570 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SOX1O00570 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SOX1O00570 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SOX1O00570 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SOX1O00570 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SOX1O00570 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.51■■□□□ 1.67
SOX1O00570 AC099791.1-201ENST00000416440 715 ntBASIC25.51■■□□□ 1.67
SOX1O00570 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SOX1O00570 DUX4L2-201ENST00000561772 1275 ntBASIC25.51■■□□□ 1.67
SOX1O00570 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.51■■□□□ 1.67
SOX1O00570 DUX4L6-201ENST00000626483 1275 ntBASIC25.51■■□□□ 1.67
SOX1O00570 DUX4L1-201ENST00000627662 1275 ntBASIC25.51■■□□□ 1.67
SOX1O00570 DUX4L8-201ENST00000629013 1275 ntBASIC25.51■■□□□ 1.67
SOX1O00570 DUX4L3-201ENST00000630187 1275 ntBASIC25.51■■□□□ 1.67
SOX1O00570 DUX4L7-201ENST00000630678 1275 ntBASIC25.51■■□□□ 1.67
SOX1O00570 DUX4L5-201ENST00000630834 1275 ntBASIC25.51■■□□□ 1.67
SOX1O00570 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SOX1O00570 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SOX1O00570 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SOX1O00570 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SOX1O00570 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.5■■□□□ 1.67
SOX1O00570 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SOX1O00570 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SOX1O00570 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
SOX1O00570 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SOX1O00570 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.49■■□□□ 1.67
SOX1O00570 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.48■■□□□ 1.67
SOX1O00570 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SOX1O00570 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.48■■□□□ 1.67
SOX1O00570 AC066615.1-201ENST00000640911 628 ntBASIC25.48■■□□□ 1.67
SOX1O00570 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SOX1O00570 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SOX1O00570 SERBP1P1-201ENST00000396021 1160 ntBASIC25.47■■□□□ 1.67
SOX1O00570 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.47■■□□□ 1.67
SOX1O00570 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SOX1O00570 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.46■■□□□ 1.67
SOX1O00570 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SOX1O00570 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
SOX1O00570 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SOX1O00570 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.46■■□□□ 1.67
SOX1O00570 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
SOX1O00570 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SOX1O00570 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.44■■□□□ 1.66
SOX1O00570 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.44■■□□□ 1.66
SOX1O00570 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SOX1O00570 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.44■■□□□ 1.66
SOX1O00570 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.44■■□□□ 1.66
SOX1O00570 TMEM191A-211ENST00000637163 1067 ntBASIC25.44■■□□□ 1.66
SOX1O00570 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SOX1O00570 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SOX1O00570 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.43■■□□□ 1.66
SOX1O00570 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
SOX1O00570 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SOX1O00570 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.43■■□□□ 1.66
SOX1O00570 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SOX1O00570 ST7-AS1-201ENST00000456775 1889 ntBASIC25.43■■□□□ 1.66
SOX1O00570 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SOX1O00570 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
SOX1O00570 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SOX1O00570 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.42■■□□□ 1.66
SOX1O00570 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SOX1O00570 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
SOX1O00570 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
SOX1O00570 YBX1P1-201ENST00000445822 960 ntBASIC25.41■■□□□ 1.66
SOX1O00570 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.41■■□□□ 1.66
SOX1O00570 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
SOX1O00570 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SOX1O00570 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SOX1O00570 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
SOX1O00570 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SOX1O00570 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SOX1O00570 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SOX1O00570 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms