Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV27A0A0K0K1C4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV27A0A0K0K1C4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV27A0A0K0K1C4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV27A0A0K0K1C4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV27A0A0K0K1C4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV27A0A0K0K1C4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV27A0A0K0K1C4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV27A0A0K0K1C4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRBV27A0A0K0K1C4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV27A0A0K0K1C4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV27A0A0K0K1C4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV27A0A0K0K1C4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV27A0A0K0K1C4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV27A0A0K0K1C4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRBV27A0A0K0K1C4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV27A0A0K0K1C4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV27A0A0K0K1C4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV27A0A0K0K1C4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV27A0A0K0K1C4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV27A0A0K0K1C4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV27A0A0K0K1C4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV27A0A0K0K1C4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV27A0A0K0K1C4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV27A0A0K0K1C4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV27A0A0K0K1C4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV27A0A0K0K1C4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV27A0A0K0K1C4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV27A0A0K0K1C4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV27A0A0K0K1C4 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.55■□□□□ 0.24
TRBV27A0A0K0K1C4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBV27A0A0K0K1C4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV27A0A0K0K1C4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV27A0A0K0K1C4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 HLA-L-211ENST00000482052 1765 ntBASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.52■□□□□ 0.24
TRBV27A0A0K0K1C4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TRBV27A0A0K0K1C4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV27A0A0K0K1C4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV27A0A0K0K1C4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV27A0A0K0K1C4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TRBV27A0A0K0K1C4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV27A0A0K0K1C4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV27A0A0K0K1C4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 MIR3960-201ENST00000583311 91 ntBASIC16.49■□□□□ 0.23
TRBV27A0A0K0K1C4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms