Protein–RNA interactions for Protein: Q9Y606

PUS1, tRNA pseudouridine synthase A, humanhuman

Known RBP eCLIP

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUS1Q9Y606 UBA2-203ENST00000586313 1458 ntTSL 215.43■□□□□ 0.063e-8■■■■■ 37.8
PUS1Q9Y606 UBA2-205ENST00000590048 847 ntTSL 311.23□□□□□ -0.613e-8■■■■■ 37.8
PUS1Q9Y606 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.663e-8■■■■■ 37.8
PUS1Q9Y606 AKAP6-202ENST00000553547 2274 ntTSL 27.72□□□□□ -1.172e-11■■■■■ 37.8
PUS1Q9Y606 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.72□□□□□ -1.332e-11■■■■■ 37.8
PUS1Q9Y606 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.67□□□□□ -1.662e-11■■■■■ 37.8
PUS1Q9Y606 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.832e-11■■■■■ 37.8
PUS1Q9Y606 UBA2-209ENST00000592841 344 ntTSL 21.65□□□□□ -2.153e-8■■■■■ 37.8
PUS1Q9Y606 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC10.47□□□□□ -0.731e-8■■■■■ 37
PUS1Q9Y606 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.83□□□□□ -0.359e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.75□□□□□ -0.379e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.93□□□□□ -0.59e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.74□□□□□ -0.539e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.4□□□□□ -0.589e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-207ENST00000479615 904 ntTSL 511.19□□□□□ -0.629e-8■■■■■ 35.6
PUS1Q9Y606 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.639e-8■■■■■ 35.6
PUS1Q9Y606 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.69■□□□□ 0.263e-7■■■■■ 33.3
PUS1Q9Y606 MIR210HG-202ENST00000528245 659 ntTSL 311.85□□□□□ -0.513e-7■■■■■ 33.3
PUS1Q9Y606 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.78□□□□□ -0.523e-7■■■■■ 33.3
PUS1Q9Y606 MIR210HG-204ENST00000534540 367 ntTSL 210.74□□□□□ -0.693e-7■■■■■ 33.3
PUS1Q9Y606 MIR210-201ENST00000362168 110 ntBASIC7.57□□□□□ -1.23e-7■■■■■ 33.3
PUS1Q9Y606 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.37□□□□□ -0.118e-7■■■■■ 31.1
PUS1Q9Y606 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.148e-7■■■■■ 31.1
PUS1Q9Y606 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.168e-7■■■■■ 31.1
PUS1Q9Y606 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.99□□□□□ -0.178e-7■■■■■ 31.1
PUS1Q9Y606 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.278e-7■■■■■ 31.1
PUS1Q9Y606 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.278e-7■■■■■ 31.1
PUS1Q9Y606 OPA1-214ENST00000482865 567 ntTSL 42.69□□□□□ -1.988e-7■■■■■ 31.1
PUS1Q9Y606 GSE1-204ENST00000411612 872 ntTSL 516.25■□□□□ 0.194e-12■■■■■ 30
PUS1Q9Y606 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.394e-12■■■■■ 30
PUS1Q9Y606 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.444e-12■■■■■ 30
PUS1Q9Y606 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.454e-12■■■■■ 30
PUS1Q9Y606 GSE1-215ENST00000635906 666 ntTSL 39.55□□□□□ -0.884e-12■■■■■ 30
PUS1Q9Y606 ZNF800-207ENST00000485577 1478 ntTSL 518.04■□□□□ 0.485e-6■■■■■ 29
PUS1Q9Y606 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.332e-6■■■■■ 28.9
PUS1Q9Y606 AL669831.3-205ENST00000641296 1127 nt13.25□□□□□ -0.292e-6■■■■■ 28.9
PUS1Q9Y606 AL669831.3-204ENST00000440196 1022 ntTSL 513.01□□□□□ -0.332e-6■■■■■ 28.9
PUS1Q9Y606 PTPRE-203ENST00000442830 779 ntTSL 510.11□□□□□ -0.792e-6■■■■■ 28.9
PUS1Q9Y606 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC9.84□□□□□ -0.832e-6■■■■■ 28.9
PUS1Q9Y606 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC8.23□□□□□ -1.092e-6■■■■■ 28.9
PUS1Q9Y606 AL669831.3-210ENST00000452176 818 ntTSL 1 (best)7.1□□□□□ -1.272e-6■■■■■ 28.9
PUS1Q9Y606 AL669831.3-207ENST00000635509 941 ntTSL 56.93□□□□□ -1.32e-6■■■■■ 28.9
PUS1Q9Y606 AL669831.3-209ENST00000440200 413 ntTSL 53.99□□□□□ -1.772e-6■■■■■ 28.9
PUS1Q9Y606 AL669831.3-203ENST00000419394 491 ntTSL 52.22□□□□□ -2.052e-6■■■■■ 28.9
PUS1Q9Y606 MT-TT-201ENST00000387460 66 ntBASIC-0.38□□□□□ -2.471e-78■■■■■ 28.7
PUS1Q9Y606 HOXC10-205ENST00000515593 526 ntTSL 46.73□□□□□ -1.337e-6■■■■□ 26.7
PUS1Q9Y606 MT-TR-201ENST00000387439 65 ntBASIC-2.37□□□□□ -2.797e-6■■■■□ 26.7
PUS1Q9Y606 NKTR-204ENST00000445842 560 ntTSL 517.78■□□□□ 0.443e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.42□□□□□ -0.263e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-214ENST00000478488 698 ntTSL 313.19□□□□□ -0.33e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-215ENST00000487466 2335 ntTSL 213.13□□□□□ -0.313e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.713e-7■■■■□ 24.9
PUS1Q9Y606 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.913e-7■■■■□ 24.9
PUS1Q9Y606 NCAPG2-204ENST00000432615 4134 ntTSL 58.26□□□□□ -1.093e-7■■■■□ 24.9
PUS1Q9Y606 NCAPG2-205ENST00000441982 2926 ntTSL 28.06□□□□□ -1.123e-7■■■■□ 24.9
PUS1Q9Y606 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.273e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-211ENST00000468735 7964 ntTSL 26.29□□□□□ -1.43e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.48□□□□□ -1.853e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-202ENST00000429888 7325 ntTSL 53.39□□□□□ -1.873e-7■■■■□ 24.9
PUS1Q9Y606 NKTR-209ENST00000465584 3839 ntTSL 21.88□□□□□ -2.113e-7■■■■□ 24.9
PUS1Q9Y606 PLXDC1-215ENST00000579190 565 ntTSL 412.42□□□□□ -0.429e-30■■■■□ 22.5
PUS1Q9Y606 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.012e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.24□□□□□ -0.132e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.242e-6■■■■□ 22.1
PUS1Q9Y606 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.462e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-207ENST00000459747 594 ntTSL 411.63□□□□□ -0.552e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-221ENST00000495875 545 ntTSL 26.78□□□□□ -1.322e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-209ENST00000460591 898 ntTSL 36.74□□□□□ -1.332e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-212ENST00000464596 989 ntTSL 56.49□□□□□ -1.372e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.432e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC5.53□□□□□ -1.522e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.592e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.82□□□□□ -1.642e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.82□□□□□ -1.642e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.792e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.74□□□□□ -1.812e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.62□□□□□ -1.832e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.18□□□□□ -1.92e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.09□□□□□ -1.912e-6■■■■□ 22.1
PUS1Q9Y606 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.99□□□□□ -1.932e-6■■■■□ 22.1
PUS1Q9Y606 FMC1-205ENST00000488886 432 ntTSL 310.79□□□□□ -0.681e-323■■■■□ 21.8
PUS1Q9Y606 FMC1-203ENST00000481123 460 ntTSL 210.44□□□□□ -0.741e-323■■■■□ 21.8
PUS1Q9Y606 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC10.38□□□□□ -0.751e-323■■■■□ 21.8
PUS1Q9Y606 FMC1-202ENST00000468383 345 ntTSL 310.3□□□□□ -0.761e-323■■■■□ 21.8
PUS1Q9Y606 FMC1-204ENST00000482181 386 ntTSL 29.16□□□□□ -0.941e-323■■■■□ 21.8
PUS1Q9Y606 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.331e-7■■■■□ 20.7
PUS1Q9Y606 MGAT4B-203ENST00000518168 1013 ntTSL 214.23□□□□□ -0.131e-7■■■■□ 20.7
PUS1Q9Y606 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.149e-7■■■□□ 18.7
PUS1Q9Y606 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.329e-7■■■□□ 18.7
PUS1Q9Y606 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.385e-20■■■□□ 18.1
PUS1Q9Y606 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.645e-20■■■□□ 18.1
PUS1Q9Y606 SYCP2L-202ENST00000341041 3069 ntTSL 29.71□□□□□ -0.865e-20■■■□□ 18.1
PUS1Q9Y606 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.04■□□□□ 0.86e-7■■■□□ 17.8
PUS1Q9Y606 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.66e-7■■■□□ 17.8
PUS1Q9Y606 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.596e-7■■■□□ 17.8
PUS1Q9Y606 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.496e-7■■■□□ 17.8
PUS1Q9Y606 DAZAP1-204ENST00000586579 619 ntTSL 317■□□□□ 0.316e-7■■■□□ 17.8
PUS1Q9Y606 DAZAP1-210ENST00000592453 1021 ntTSL 511.61□□□□□ -0.556e-7■■■□□ 17.8
PUS1Q9Y606 HFM1-204ENST00000448819 540 ntTSL 56.79□□□□□ -1.328e-13■■■□□ 17.8
PUS1Q9Y606 HFM1-208ENST00000488023 1699 ntTSL 52.83□□□□□ -1.968e-13■■■□□ 17.8
Retrieved 100 of 280 protein–RNA pairs in 22.4 ms