Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ABHD14A-ACY1-211ENST00000636085 1188 ntTSL 513.6□□□□□ -0.236e-13■■■■■ 51.3
LARP4Q71RC2 ABHD14A-ACY1-213ENST00000636264 516 ntTSL 512.68□□□□□ -0.386e-13■■■■■ 51.3
LARP4Q71RC2 ABHD14A-ACY1-205ENST00000635785 1060 ntTSL 511.22□□□□□ -0.616e-13■■■■■ 51.3
LARP4Q71RC2 ABHD14A-ACY1-223ENST00000637461 566 ntTSL 59.63□□□□□ -0.876e-13■■■■■ 51.3
LARP4Q71RC2 NDUFB9-203ENST00000517830 320 ntTSL 38.62□□□□□ -1.039e-11■■■■■ 50.6
LARP4Q71RC2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.223e-9■■■■■ 50.4
LARP4Q71RC2 S100P-201ENST00000296370 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.923e-8■■■■■ 50.3
LARP4Q71RC2 S100P-202ENST00000513778 313 ntTSL 34.79□□□□□ -1.643e-8■■■■■ 50.3
LARP4Q71RC2 CRACR2B-205ENST00000527763 1728 ntTSL 226.37■■□□□ 1.811e-9■■■■■ 50.2
LARP4Q71RC2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.25■■□□□ 1.311e-9■■■■■ 50.2
LARP4Q71RC2 CRACR2B-210ENST00000530688 1623 ntTSL 222.19■■□□□ 1.141e-9■■■■■ 50.2
LARP4Q71RC2 CRACR2B-208ENST00000528694 2440 ntTSL 221.92■■□□□ 1.11e-9■■■■■ 50.2
LARP4Q71RC2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.11e-9■■■■■ 50.2
LARP4Q71RC2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.98■□□□□ 0.631e-9■■■■■ 50.2
LARP4Q71RC2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.95■□□□□ 0.621e-9■■■■■ 50.2
LARP4Q71RC2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.79■□□□□ 0.444e-10■■■■■ 50.2
LARP4Q71RC2 ZNF451-209ENST00000502749 790 ntTSL 517.71■□□□□ 0.431e-9■■■■■ 50.2
LARP4Q71RC2 ZNF451-216ENST00000510483 719 ntTSL 417.51■□□□□ 0.391e-9■■■■■ 50.2
LARP4Q71RC2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.11e-9■■■■■ 50.2
LARP4Q71RC2 ZNF451-207ENST00000444273 3402 ntTSL 1 (best)15.47■□□□□ 0.071e-9■■■■■ 50.2
LARP4Q71RC2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.89□□□□□ -0.034e-10■■■■■ 50.2
LARP4Q71RC2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.081e-9■■■■■ 50.2
LARP4Q71RC2 AC009403.2-204ENST00000637398 2744 ntTSL 513.46□□□□□ -0.265e-6■■■■■ 50.2
LARP4Q71RC2 AC009403.1-201ENST00000401694 512 ntTSL 413.35□□□□□ -0.275e-6■■■■■ 50.2
LARP4Q71RC2 PSMB5-206ENST00000555895 444 ntTSL 312.96□□□□□ -0.334e-10■■■■■ 50.2
LARP4Q71RC2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.96□□□□□ -0.334e-10■■■■■ 50.2
LARP4Q71RC2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.334e-10■■■■■ 50.2
LARP4Q71RC2 ZNF451-206ENST00000370711 609 ntTSL 411.98□□□□□ -0.491e-9■■■■■ 50.2
LARP4Q71RC2 AC009403.2-203ENST00000635770 2977 ntTSL 510.4□□□□□ -0.755e-6■■■■■ 50.2
LARP4Q71RC2 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC8.83□□□□□ -15e-6■■■■■ 50.2
LARP4Q71RC2 ZNF451-215ENST00000509251 513 ntTSL 46□□□□□ -1.451e-9■■■■■ 50.2
LARP4Q71RC2 ZNF451-211ENST00000504603 561 ntTSL 54.89□□□□□ -1.631e-9■■■■■ 50.2
LARP4Q71RC2 ZNF451-218ENST00000515290 581 ntTSL 44.68□□□□□ -1.661e-9■■■■■ 50.2
LARP4Q71RC2 ZNF451-214ENST00000509071 477 ntTSL 54.11□□□□□ -1.751e-9■■■■■ 50.2
LARP4Q71RC2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.081e-9■■■■■ 50.2
LARP4Q71RC2 CHURC1-FNTB-203ENST00000552941 1847 ntTSL 213.43□□□□□ -0.262e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-FNTB-201ENST00000549987 1468 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.852e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-205ENST00000551947 1521 ntTSL 28.96□□□□□ -0.972e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.982e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC8.35□□□□□ -1.072e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.79□□□□□ -1.162e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.54□□□□□ -1.22e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-204ENST00000551093 1023 ntTSL 27.01□□□□□ -1.292e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-FNTB-204ENST00000553743 207 ntTSL 26.16□□□□□ -1.422e-11■■■■■ 50.1
LARP4Q71RC2 CHURC1-FNTB-202ENST00000551823 517 ntTSL 25.53□□□□□ -1.522e-11■■■■■ 50.1
LARP4Q71RC2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.393e-8■■■■■ 50
LARP4Q71RC2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.313e-8■■■■■ 50
LARP4Q71RC2 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.86□□□□□ -0.353e-8■■■■■ 50
LARP4Q71RC2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.747e-10■■■■■ 50
LARP4Q71RC2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.597e-10■■■■■ 50
LARP4Q71RC2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.297e-10■■■■■ 50
LARP4Q71RC2 SRRT-204ENST00000448764 1607 ntTSL 516.45■□□□□ 0.229e-14■■■■■ 49.8
LARP4Q71RC2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.029e-14■■■■■ 49.8
LARP4Q71RC2 SRRT-210ENST00000477529 540 ntTSL 212.89□□□□□ -0.359e-14■■■■■ 49.8
LARP4Q71RC2 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.519e-14■■■■■ 49.8
LARP4Q71RC2 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.69e-14■■■■■ 49.8
LARP4Q71RC2 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.659e-14■■■■■ 49.8
LARP4Q71RC2 SRRT-203ENST00000445337 446 ntTSL 36.05□□□□□ -1.449e-14■■■■■ 49.8
LARP4Q71RC2 ANAPC11-222ENST00000585259 345 ntTSL 514.23□□□□□ -0.138e-10■■■■■ 49.3
LARP4Q71RC2 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC10.68□□□□□ -0.78e-10■■■■■ 49.3
LARP4Q71RC2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.04■□□□□ 0.168e-8■■■■■ 48.7
LARP4Q71RC2 AP2S1-209ENST00000601498 898 ntTSL 2 BASIC11.79□□□□□ -0.528e-8■■■■■ 48.7
LARP4Q71RC2 NDUFB9-207ENST00000524241 654 ntTSL 26.62□□□□□ -1.357e-11■■■■■ 48.1
LARP4Q71RC2 DNPH1-204ENST00000509253 834 ntTSL 327.64■■■□□ 2.026e-11■■■■■ 48.1
LARP4Q71RC2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.866e-11■■■■■ 48.1
LARP4Q71RC2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.65■□□□□ 0.426e-11■■■■■ 48.1
LARP4Q71RC2 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.963e-8■■■■■ 47.3
LARP4Q71RC2 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.94■□□□□ 0.34e-9■■■■■ 47.2
LARP4Q71RC2 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.94■□□□□ 0.34e-9■■■■■ 47.2
LARP4Q71RC2 DDT-207ENST00000444947 1048 ntTSL 215.52■□□□□ 0.084e-9■■■■■ 47.2
LARP4Q71RC2 CD63-216ENST00000555199 230 ntTSL 210.2□□□□□ -0.787e-13■■■■■ 47.2
LARP4Q71RC2 NDUFV1-208ENST00000526770 1748 ntTSL 518.39■□□□□ 0.532e-20■■■■■ 47.1
LARP4Q71RC2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.97■□□□□ 0.312e-20■■■■■ 47.1
LARP4Q71RC2 NDUFV1-228ENST00000534352 573 ntTSL 216.85■□□□□ 0.292e-20■■■■■ 47.1
LARP4Q71RC2 NDUFV1-220ENST00000531250 736 ntTSL 216.07■□□□□ 0.162e-20■■■■■ 47.1
LARP4Q71RC2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.092e-20■■■■■ 47.1
LARP4Q71RC2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.052e-20■■■■■ 47.1
LARP4Q71RC2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.072e-20■■■■■ 47.1
LARP4Q71RC2 NDUFV1-226ENST00000533919 774 ntTSL 312.92□□□□□ -0.342e-20■■■■■ 47.1
LARP4Q71RC2 NDUFV1-209ENST00000527355 679 ntTSL 212.92□□□□□ -0.342e-20■■■■■ 47.1
LARP4Q71RC2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.162e-10■■■■■ 46.8
LARP4Q71RC2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.8■□□□□ 0.768e-8■■■■■ 46.8
LARP4Q71RC2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.738e-8■■■■■ 46.8
LARP4Q71RC2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.698e-8■■■■■ 46.8
LARP4Q71RC2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.04■□□□□ 0.168e-8■■■■■ 46.8
LARP4Q71RC2 HIST1H4H-203ENST00000634956 2163 ntTSL 57.43□□□□□ -1.221e-8■■■■■ 45.8
LARP4Q71RC2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.11■□□□□ 0.331e-26■■■■■ 45.5
LARP4Q71RC2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.251e-26■■■■■ 45.5
LARP4Q71RC2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.191e-26■■■■■ 45.5
LARP4Q71RC2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.041e-26■■■■■ 45.5
LARP4Q71RC2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.215e-7■■■■■ 45.2
LARP4Q71RC2 SELENOH-203ENST00000533321 1454 ntTSL 1 (best)15.4■□□□□ 0.065e-7■■■■■ 45.2
LARP4Q71RC2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.055e-7■■■■■ 45.2
LARP4Q71RC2 SELENOH-202ENST00000528798 469 ntTSL 214.23□□□□□ -0.135e-7■■■■■ 45.2
LARP4Q71RC2 SELENOH-205ENST00000534386 1039 ntTSL 213.42□□□□□ -0.265e-7■■■■■ 45.2
LARP4Q71RC2 RBX1-202ENST00000467617 1871 ntTSL 212.56□□□□□ -0.42e-11■■■■■ 44.9
LARP4Q71RC2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.381e-26■■■■■ 44.7
LARP4Q71RC2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.88■□□□□ 0.618e-10■■■■■ 44.5
LARP4Q71RC2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.68e-10■■■■■ 44.5
LARP4Q71RC2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.35■□□□□ 0.538e-10■■■■■ 44.5
Retrieved 100 of 15,922 protein–RNA pairs in 342 ms