Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YCH1YGR203W 447 nt19.79■□□□□ 0.76
RKR1Q04781 CCT6YDR188W 1641 nt19.75■□□□□ 0.75
RKR1Q04781 IMP2'YIL154C 1041 nt19.74■□□□□ 0.75
RKR1Q04781 ADO1YJR105W 1023 nt19.7■□□□□ 0.74
RKR1Q04781 YEL076C-AYEL076C-A 651 nt19.67■□□□□ 0.74
RKR1Q04781 YEL076CYEL076C 651 nt19.67■□□□□ 0.74
RKR1Q04781 YLR464WYLR464W 651 nt19.67■□□□□ 0.74
RKR1Q04781 SPP1YPL138C 1062 nt19.67■□□□□ 0.74
RKR1Q04781 YJL152WYJL152W 360 nt19.61■□□□□ 0.73
RKR1Q04781 RTG1YOL067C 534 nt19.55■□□□□ 0.72
RKR1Q04781 ERV46YAL042W 1248 nt19.54■□□□□ 0.72
RKR1Q04781 ALF1YNL148C 765 nt19.53■□□□□ 0.72
RKR1Q04781 SUF2tP(AGG)C 72 nt19.49■□□□□ 0.71
RKR1Q04781 SUF10tP(AGG)N 72 nt19.49■□□□□ 0.71
RKR1Q04781 IDH1YNL037C 1083 nt19.42■□□□□ 0.7
RKR1Q04781 YDR095CYDR095C 411 nt19.4■□□□□ 0.7
RKR1Q04781 TIR4YOR009W 1464 nt19.38■□□□□ 0.69
RKR1Q04781 MXR2YCL033C 507 nt19.35■□□□□ 0.69
RKR1Q04781 SIS1YNL007C 1059 nt19.34■□□□□ 0.69
RKR1Q04781 YPS1YLR120C 1710 nt19.34■□□□□ 0.69
RKR1Q04781 YDR433WYDR433W 441 nt19.33■□□□□ 0.69
RKR1Q04781 YFL015W-AYFL015W-A 318 nt19.27■□□□□ 0.67
RKR1Q04781 YDR094WYDR094W 336 nt19.23■□□□□ 0.67
RKR1Q04781 GBP2YCL011C 1284 nt19.19■□□□□ 0.66
RKR1Q04781 YKR040CYKR040C 504 nt19.12■□□□□ 0.65
RKR1Q04781 YHR165W-AYHR165W-A 312 nt19.11■□□□□ 0.65
RKR1Q04781 YCL048W-AYCL048W-A 240 nt18.98■□□□□ 0.63
RKR1Q04781 HUA1YGR268C 597 nt18.96■□□□□ 0.63
RKR1Q04781 ART5YGR068C 1761 nt18.94■□□□□ 0.62
RKR1Q04781 SBA1YKL117W 651 nt18.92■□□□□ 0.62
RKR1Q04781 RPP2AYOL039W 321 nt18.9■□□□□ 0.62
RKR1Q04781 GFD2YCL036W 1701 nt18.9■□□□□ 0.62
RKR1Q04781 YMR057CYMR057C 372 nt18.89■□□□□ 0.62
RKR1Q04781 PTH1YHR189W 573 nt18.89■□□□□ 0.61
RKR1Q04781 CAC2YML102W 1407 nt18.88■□□□□ 0.61
RKR1Q04781 PTP1YDL230W 1008 nt18.85■□□□□ 0.61
RKR1Q04781 TCD2YKL027W 1344 nt18.84■□□□□ 0.61
RKR1Q04781 FRD1YEL047C 1413 nt18.78■□□□□ 0.6
RKR1Q04781 RTS2YOR077W 699 nt18.76■□□□□ 0.59
RKR1Q04781 DED1YOR204W 1815 nt18.73■□□□□ 0.59
RKR1Q04781 PET9YBL030C 957 nt18.7■□□□□ 0.58
RKR1Q04781 RRD1YIL153W 1182 nt18.65■□□□□ 0.58
RKR1Q04781 MEP2YNL142W 1500 nt18.61■□□□□ 0.57
RKR1Q04781 PAU16YKL224C 372 nt18.59■□□□□ 0.57
RKR1Q04781 SOR2YDL246C 1074 nt18.58■□□□□ 0.56
RKR1Q04781 SOR1YJR159W 1074 nt18.58■□□□□ 0.56
RKR1Q04781 DCW1YKL046C 1350 nt18.57■□□□□ 0.56
RKR1Q04781 FPS1YLL043W 2010 nt18.54■□□□□ 0.56
RKR1Q04781 YCL042WYCL042W 360 nt18.51■□□□□ 0.55
RKR1Q04781 FMT1YBL013W 1206 nt18.5■□□□□ 0.55
RKR1Q04781 YLR235CYLR235C 399 nt18.47■□□□□ 0.55
RKR1Q04781 YKL030WYKL030W 606 nt18.46■□□□□ 0.55
RKR1Q04781 LCB1YMR296C 1677 nt18.46■□□□□ 0.54
RKR1Q04781 PRE6YOL038W 765 nt18.34■□□□□ 0.53
RKR1Q04781 IRC15YPL017C 1500 nt18.33■□□□□ 0.52
RKR1Q04781 CUE1YMR264W 612 nt18.3■□□□□ 0.52
RKR1Q04781 SPT5YML010W 3192 nt18.29■□□□□ 0.52
RKR1Q04781 EMI2YDR516C 1503 nt18.23■□□□□ 0.51
RKR1Q04781 CWP1YKL096W 720 nt18.23■□□□□ 0.51
RKR1Q04781 TIM23YNR017W 669 nt18.19■□□□□ 0.5
RKR1Q04781 YFR018CYFR018C 1092 nt18.17■□□□□ 0.5
RKR1Q04781 ADH2YMR303C 1047 nt18.15■□□□□ 0.5
RKR1Q04781 tL(GAG)GtL(GAG)G 82 nt18.14■□□□□ 0.49
RKR1Q04781 DIC1YLR348C 897 nt18.14■□□□□ 0.49
RKR1Q04781 FMP52YER004W 696 nt18.13■□□□□ 0.49
RKR1Q04781 YDL221WYDL221W 552 nt18.12■□□□□ 0.49
RKR1Q04781 RRT5YFR032C 870 nt18.08■□□□□ 0.48
RKR1Q04781 YLR179CYLR179C 606 nt18.04■□□□□ 0.48
RKR1Q04781 GIS3YLR094C 1509 nt18.03■□□□□ 0.48
RKR1Q04781 YIL100WYIL100W 354 nt18.01■□□□□ 0.47
RKR1Q04781 SNF6YHL025W 999 nt18■□□□□ 0.47
RKR1Q04781 WSC2YNL283C 1512 nt17.87■□□□□ 0.45
RKR1Q04781 YPR064WYPR064W 420 nt17.86■□□□□ 0.45
RKR1Q04781 PCM1YEL058W 1674 nt17.8■□□□□ 0.44
RKR1Q04781 PEX25YPL112C 1185 nt17.79■□□□□ 0.44
RKR1Q04781 YIH1YCR059C 777 nt17.77■□□□□ 0.44
RKR1Q04781 YFL066CYFL066C 1179 nt17.76■□□□□ 0.43
RKR1Q04781 TAD3YLR316C 969 nt17.76■□□□□ 0.43
RKR1Q04781 SDH1YKL148C 1923 nt17.76■□□□□ 0.43
RKR1Q04781 SCC4YER147C 1875 nt17.75■□□□□ 0.43
RKR1Q04781 YMR090WYMR090W 684 nt17.75■□□□□ 0.43
RKR1Q04781 RNQ1YCL028W 1218 nt17.68■□□□□ 0.42
RKR1Q04781 NAT4YMR069W 858 nt17.66■□□□□ 0.42
RKR1Q04781 AHT1YHR093W 549 nt17.65■□□□□ 0.42
RKR1Q04781 YLL053CYLL053C 459 nt17.59■□□□□ 0.41
RKR1Q04781 YSC84YHR016C 1407 nt17.58■□□□□ 0.4
RKR1Q04781 BIO4YNR057C 714 nt17.57■□□□□ 0.4
RKR1Q04781 YBR220CYBR220C 1683 nt17.56■□□□□ 0.4
RKR1Q04781 YNL115CYNL115C 1935 nt17.55■□□□□ 0.4
RKR1Q04781 YSP3YOR003W 1437 nt17.54■□□□□ 0.4
RKR1Q04781 FTR1YER145C 1215 nt17.52■□□□□ 0.39
RKR1Q04781 BDH1YAL060W 1149 nt17.5■□□□□ 0.39
RKR1Q04781 GLK1YCL040W 1503 nt17.5■□□□□ 0.39
RKR1Q04781 YMR244WYMR244W 1068 nt17.49■□□□□ 0.39
RKR1Q04781 SSA4YER103W 1929 nt17.46■□□□□ 0.39
RKR1Q04781 MIR1YJR077C 936 nt17.44■□□□□ 0.38
RKR1Q04781 YNL195CYNL195C 786 nt17.44■□□□□ 0.38
RKR1Q04781 RRT12YCR045C 1476 nt17.43■□□□□ 0.38
RKR1Q04781 MSF1YPR047W 1410 nt17.43■□□□□ 0.38
RKR1Q04781 GAL1YBR020W 1587 nt17.42■□□□□ 0.38
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms