Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 PNCK-205ENST00000411968 557 ntTSL 58.18□□□□□ -1.17e-11■■■■■ 47.4
EWSR1Q01844 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.273e-7■■■■■ 47.1
EWSR1Q01844 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.464e-7■■■■■ 46.8
EWSR1Q01844 DPH7-210ENST00000479650 1797 ntTSL 515.01□□□□□ -0.014e-7■■■■■ 46.8
EWSR1Q01844 DPH7-207ENST00000475100 919 ntTSL 312.32□□□□□ -0.444e-7■■■■■ 46.8
EWSR1Q01844 DPH7-206ENST00000472113 1414 ntTSL 511.33□□□□□ -0.64e-7■■■■■ 46.8
EWSR1Q01844 DPH7-212ENST00000485189 797 ntTSL 311.14□□□□□ -0.634e-7■■■■■ 46.8
EWSR1Q01844 DPH7-209ENST00000477690 1220 ntTSL 310.45□□□□□ -0.744e-7■■■■■ 46.8
EWSR1Q01844 DPH7-204ENST00000467768 750 ntTSL 510.45□□□□□ -0.744e-7■■■■■ 46.8
EWSR1Q01844 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.21□□□□□ -0.136e-7■■■■■ 45.9
EWSR1Q01844 BAGE2-201ENST00000470054 1891 ntTSL 1 (best)12.11□□□□□ -0.476e-7■■■■■ 45.9
EWSR1Q01844 AL390719.1-206ENST00000451054 565 ntTSL 29.16□□□□□ -0.949e-8■■■■■ 45.3
EWSR1Q01844 AL390719.1-205ENST00000433695 540 ntTSL 28.64□□□□□ -1.039e-8■■■■■ 45.3
EWSR1Q01844 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.04■□□□□ 0.323e-7■■■■■ 45.1
EWSR1Q01844 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.3□□□□□ -0.443e-7■■■■■ 45.1
EWSR1Q01844 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.8□□□□□ -0.683e-7■■■■■ 45.1
EWSR1Q01844 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.953e-7■■■■■ 45.1
EWSR1Q01844 PCMTD2-209ENST00000609818 551 ntTSL 44.96□□□□□ -1.623e-7■■■■■ 45.1
EWSR1Q01844 DTX2P1-UPK3BP1-PMS2P11-202ENST00000584900 1636 ntTSL 214.44□□□□□ -0.12e-7■■■■■ 45
EWSR1Q01844 DTX2P1-UPK3BP1-PMS2P11-201ENST00000579700 1222 ntTSL 211.62□□□□□ -0.552e-7■■■■■ 45
EWSR1Q01844 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.55□□□□□ -0.562e-7■■■■■ 45
EWSR1Q01844 DTX2P1-201ENST00000425797 1633 ntBASIC10.7□□□□□ -0.72e-7■■■■■ 45
EWSR1Q01844 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.08■□□□□ 0.654e-10■■■■■ 45
EWSR1Q01844 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.031e-11■■■■■ 44.4
EWSR1Q01844 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC8.51□□□□□ -1.056e-12■■■■■ 44.3
EWSR1Q01844 SRP14-AS1-201ENST00000504245 2317 ntTSL 2 BASIC9.33□□□□□ -0.921e-6■■■■■ 43.5
EWSR1Q01844 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.38□□□□□ -1.551e-6■■■■■ 43.5
EWSR1Q01844 GAK-208ENST00000507124 552 ntTSL 417.51■□□□□ 0.391e-11■■■■■ 43.1
EWSR1Q01844 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.73■□□□□ 0.275e-10■■■■■ 42.7
EWSR1Q01844 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.275e-10■■■■■ 42.7
EWSR1Q01844 TFPT-204ENST00000420715 737 ntTSL 516.73■□□□□ 0.275e-10■■■■■ 42.7
EWSR1Q01844 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.195e-10■■■■■ 42.7
EWSR1Q01844 DAZAP1-209ENST00000590419 508 ntTSL 310.74□□□□□ -0.691e-8■■■■■ 42.3
EWSR1Q01844 GAK-218ENST00000511983 558 ntTSL 48.8□□□□□ -11e-7■■■■■ 42.2
EWSR1Q01844 BBC3-205ENST00000598636 900 ntTSL 217.48■□□□□ 0.398e-12■■■■■ 42
EWSR1Q01844 ISYNA1-204ENST00000577916 2148 ntTSL 521.13■□□□□ 0.979e-12■■■■■ 41.5
EWSR1Q01844 ISYNA1-211ENST00000582811 2039 ntTSL 218.4■□□□□ 0.549e-12■■■■■ 41.5
EWSR1Q01844 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.249e-12■■■■■ 41.5
EWSR1Q01844 ISYNA1-213ENST00000583534 629 ntTSL 1 (best)14.96□□□□□ -0.019e-12■■■■■ 41.5
EWSR1Q01844 ISYNA1-210ENST00000582770 1654 ntTSL 214.61□□□□□ -0.079e-12■■■■■ 41.5
EWSR1Q01844 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.07□□□□□ -0.169e-12■■■■■ 41.5
EWSR1Q01844 ISYNA1-205ENST00000578352 592 ntTSL 214.02□□□□□ -0.179e-12■■■■■ 41.5
EWSR1Q01844 ISYNA1-208ENST00000581800 627 ntTSL 411.78□□□□□ -0.529e-12■■■■■ 41.5
EWSR1Q01844 ISYNA1-203ENST00000577820 1466 ntTSL 510.89□□□□□ -0.679e-12■■■■■ 41.5
EWSR1Q01844 EHMT1-250ENST00000637977 2167 ntTSL 513.43□□□□□ -0.262e-7■■■■■ 41.2
EWSR1Q01844 EHMT1-202ENST00000460486 818 ntTSL 512.76□□□□□ -0.372e-7■■■■■ 41.2
EWSR1Q01844 EHMT1-219ENST00000626066 1297 ntTSL 512.34□□□□□ -0.432e-7■■■■■ 41.2
EWSR1Q01844 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC9.55□□□□□ -0.882e-7■■■■■ 41.2
EWSR1Q01844 AL390719.1-204ENST00000412397 1219 ntBASIC15.1■□□□□ 0.012e-7■■■■■ 40.8
EWSR1Q01844 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.43□□□□□ -0.12e-7■■■■■ 40.8
EWSR1Q01844 AL390719.1-203ENST00000456409 750 ntTSL 28.49□□□□□ -1.052e-7■■■■■ 40.8
EWSR1Q01844 AL390719.1-202ENST00000394517 397 ntTSL 57.11□□□□□ -1.272e-7■■■■■ 40.8
EWSR1Q01844 RNASET2-209ENST00000499370 2164 ntTSL 29.52□□□□□ -0.895e-7■■■■■ 40.7
EWSR1Q01844 RNASET2-208ENST00000496851 881 ntTSL 58.05□□□□□ -1.125e-7■■■■■ 40.7
EWSR1Q01844 FAM182B-203ENST00000424021 605 ntTSL 510.71□□□□□ -0.691e-7■■■■■ 40.6
EWSR1Q01844 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.27■□□□□ 0.26e-11■■■■■ 40.6
EWSR1Q01844 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.496e-11■■■■■ 40.6
EWSR1Q01844 MIR661-201ENST00000384842 89 ntBASIC11.96□□□□□ -0.496e-11■■■■■ 40.6
EWSR1Q01844 TCF25-210ENST00000563484 468 ntTSL 28.29□□□□□ -1.086e-11■■■■■ 40.6
EWSR1Q01844 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.26e-11■■■■■ 40.6
EWSR1Q01844 KDELR1-205ENST00000600980 815 ntTSL 37.16□□□□□ -1.266e-11■■■■■ 40.6
EWSR1Q01844 KDELR1-204ENST00000599084 582 ntTSL 26.63□□□□□ -1.356e-11■■■■■ 40.6
EWSR1Q01844 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.926e-11■■■■■ 40.6
EWSR1Q01844 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.84□□□□□ -1.966e-11■■■■■ 40.6
EWSR1Q01844 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.036e-11■■■■■ 40.6
EWSR1Q01844 SMAP2-202ENST00000372718 2939 ntAPPRIS P1 TSL 1 (best)15.32■□□□□ 0.041e-7■■■■■ 40.3
EWSR1Q01844 SMAP2-203ENST00000435168 666 ntTSL 55.67□□□□□ -1.51e-7■■■■■ 40.3
EWSR1Q01844 CSNK1G2-205ENST00000589385 896 ntTSL 513.68□□□□□ -0.223e-8■■■■■ 40
EWSR1Q01844 RANBP1-214ENST00000488484 699 ntTSL 211.38□□□□□ -0.597e-32■■■■■ 39.6
EWSR1Q01844 CORO1C-216ENST00000551059 474 ntTSL 213.76□□□□□ -0.217e-12■■■■■ 39.6
EWSR1Q01844 CORO1C-214ENST00000550542 1245 ntTSL 513.41□□□□□ -0.267e-12■■■■■ 39.6
EWSR1Q01844 CORO1C-210ENST00000549384 891 ntTSL 513.41□□□□□ -0.267e-12■■■■■ 39.6
EWSR1Q01844 CORO1C-219ENST00000552871 587 ntTSL 313.41□□□□□ -0.267e-12■■■■■ 39.6
EWSR1Q01844 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.747e-12■■■■■ 39.6
EWSR1Q01844 CORO1C-217ENST00000551550 547 ntTSL 47.43□□□□□ -1.227e-12■■■■■ 39.6
EWSR1Q01844 ZYX-207ENST00000457235 703 ntTSL 418.64■□□□□ 0.576e-8■■■■■ 39.6
EWSR1Q01844 ZYX-208ENST00000468083 1146 ntTSL 516.16■□□□□ 0.186e-8■■■■■ 39.6
EWSR1Q01844 ZYX-206ENST00000449630 533 ntTSL 413.54□□□□□ -0.246e-8■■■■■ 39.6
EWSR1Q01844 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.182e-10■■■■■ 39.5
EWSR1Q01844 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.132e-10■■■■■ 39.5
EWSR1Q01844 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.27■■□□□ 12e-10■■■■■ 39.5
EWSR1Q01844 PQLC1-206ENST00000474967 2319 ntTSL 517.07■□□□□ 0.322e-10■■■■■ 39.5
EWSR1Q01844 PQLC1-201ENST00000351365 2414 ntTSL 216.02■□□□□ 0.152e-10■■■■■ 39.5
EWSR1Q01844 PQLC1-204ENST00000466449 2887 ntTSL 214.85□□□□□ -0.032e-10■■■■■ 39.5
EWSR1Q01844 PQLC1-205ENST00000469369 593 ntTSL 410□□□□□ -0.812e-10■■■■■ 39.5
EWSR1Q01844 PQLC1-209ENST00000589000 558 ntTSL 48.46□□□□□ -1.062e-10■■■■■ 39.5
EWSR1Q01844 INTS11-223ENST00000498173 1589 ntTSL 217.49■□□□□ 0.391e-10■■■■■ 39.4
EWSR1Q01844 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.391e-10■■■■■ 39.4
EWSR1Q01844 FAM129B-207ENST00000484348 654 ntTSL 1 (best)16.97■□□□□ 0.311e-10■■■■■ 39.4
EWSR1Q01844 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.44■□□□□ 0.221e-10■■■■■ 39.4
EWSR1Q01844 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.16■□□□□ 0.181e-10■■■■■ 39.4
EWSR1Q01844 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.65■□□□□ 0.11e-10■■■■■ 39.4
EWSR1Q01844 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.55■□□□□ 0.081e-10■■■■■ 39.4
EWSR1Q01844 INTS11-221ENST00000496353 2428 ntTSL 215.41■□□□□ 0.061e-10■■■■■ 39.4
EWSR1Q01844 INTS11-235ENST00000527719 750 ntTSL 514.88□□□□□ -0.031e-10■■■■■ 39.4
EWSR1Q01844 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.79□□□□□ -0.041e-10■■■■■ 39.4
EWSR1Q01844 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.071e-10■■■■■ 39.4
EWSR1Q01844 INTS11-220ENST00000493534 896 ntTSL 314.28□□□□□ -0.121e-10■■■■■ 39.4
EWSR1Q01844 INTS11-219ENST00000490853 704 ntTSL 314.24□□□□□ -0.131e-10■■■■■ 39.4
EWSR1Q01844 INTS11-224ENST00000498476 554 ntTSL 414.09□□□□□ -0.151e-10■■■■■ 39.4
Retrieved 100 of 7,101 protein–RNA pairs in 26.6 ms