Protein–RNA interactions for Protein: P39705

NUP60, Nucleoporin NUP60, yeastyeast

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP60P39705 YLR154C-GYLR154C-G 150 nt12.75□□□□□ -0.37
NUP60P39705 MOT3YMR070W 1473 nt12.75□□□□□ -0.37
NUP60P39705 NVJ2YPR091C 2313 nt12.72□□□□□ -0.37
NUP60P39705 DSK2YMR276W 1122 nt12.72□□□□□ -0.37
NUP60P39705 MEP2YNL142W 1500 nt12.69□□□□□ -0.38
NUP60P39705 IMP2'YIL154C 1041 nt12.69□□□□□ -0.38
NUP60P39705 YPS1YLR120C 1710 nt12.68□□□□□ -0.38
NUP60P39705 FMP45YDL222C 930 nt12.66□□□□□ -0.38
NUP60P39705 YDR095CYDR095C 411 nt12.65□□□□□ -0.38
NUP60P39705 YPR011CYPR011C 981 nt12.65□□□□□ -0.38
NUP60P39705 YLR236CYLR236C 324 nt12.63□□□□□ -0.39
NUP60P39705 YJL152WYJL152W 360 nt12.58□□□□□ -0.4
NUP60P39705 YCH1YGR203W 447 nt12.55□□□□□ -0.4
NUP60P39705 YHR165W-AYHR165W-A 312 nt12.55□□□□□ -0.4
NUP60P39705 SIS1YNL007C 1059 nt12.54□□□□□ -0.4
NUP60P39705 DCW1YKL046C 1350 nt12.47□□□□□ -0.41
NUP60P39705 IDH1YNL037C 1083 nt12.46□□□□□ -0.41
NUP60P39705 RPP2AYOL039W 321 nt12.43□□□□□ -0.42
NUP60P39705 TIR4YOR009W 1464 nt12.42□□□□□ -0.42
NUP60P39705 LPX1YOR084W 1164 nt12.41□□□□□ -0.42
NUP60P39705 ERV46YAL042W 1248 nt12.4□□□□□ -0.42
NUP60P39705 YDR433WYDR433W 441 nt12.35□□□□□ -0.43
NUP60P39705 MRPL8YJL063C 717 nt12.35□□□□□ -0.43
NUP60P39705 YBR220CYBR220C 1683 nt12.34□□□□□ -0.43
NUP60P39705 ART5YGR068C 1761 nt12.31□□□□□ -0.44
NUP60P39705 PTP1YDL230W 1008 nt12.31□□□□□ -0.44
NUP60P39705 GBP2YCL011C 1284 nt12.31□□□□□ -0.44
NUP60P39705 EMI2YDR516C 1503 nt12.3□□□□□ -0.44
NUP60P39705 PET9YBL030C 957 nt12.29□□□□□ -0.44
NUP60P39705 YKR040CYKR040C 504 nt12.28□□□□□ -0.44
NUP60P39705 YMR090WYMR090W 684 nt12.28□□□□□ -0.44
NUP60P39705 CAC2YML102W 1407 nt12.28□□□□□ -0.44
NUP60P39705 SPP1YPL138C 1062 nt12.26□□□□□ -0.45
NUP60P39705 YMR057CYMR057C 372 nt12.25□□□□□ -0.45
NUP60P39705 YCL048W-AYCL048W-A 240 nt12.24□□□□□ -0.45
NUP60P39705 GFD2YCL036W 1701 nt12.23□□□□□ -0.45
NUP60P39705 Q0182Q0182 405 nt12.2□□□□□ -0.46
NUP60P39705 ADO1YJR105W 1023 nt12.2□□□□□ -0.46
NUP60P39705 MXR2YCL033C 507 nt12.2□□□□□ -0.46
NUP60P39705 YEL076C-AYEL076C-A 651 nt12.17□□□□□ -0.46
NUP60P39705 YEL076CYEL076C 651 nt12.17□□□□□ -0.46
NUP60P39705 YLR464WYLR464W 651 nt12.17□□□□□ -0.46
NUP60P39705 PCH2YBR186W 1695 nt12.15□□□□□ -0.46
NUP60P39705 YDL221WYDL221W 552 nt12.14□□□□□ -0.47
NUP60P39705 TCD2YKL027W 1344 nt12.13□□□□□ -0.47
NUP60P39705 RTG1YOL067C 534 nt12.13□□□□□ -0.47
NUP60P39705 FPS1YLL043W 2010 nt12.13□□□□□ -0.47
NUP60P39705 GUT2YIL155C 1950 nt12.12□□□□□ -0.47
NUP60P39705 SDH1YKL148C 1923 nt12.12□□□□□ -0.47
NUP60P39705 RTS2YOR077W 699 nt12.05□□□□□ -0.48
NUP60P39705 SEC11YIR022W 504 nt12.01□□□□□ -0.49
NUP60P39705 DED1YOR204W 1815 nt12□□□□□ -0.49
NUP60P39705 RRD1YIL153W 1182 nt11.99□□□□□ -0.49
NUP60P39705 IRC15YPL017C 1500 nt11.97□□□□□ -0.49
NUP60P39705 FRD1YEL047C 1413 nt11.97□□□□□ -0.49
NUP60P39705 SCC4YER147C 1875 nt11.95□□□□□ -0.5
NUP60P39705 HUA1YGR268C 597 nt11.95□□□□□ -0.5
NUP60P39705 CUE1YMR264W 612 nt11.95□□□□□ -0.5
NUP60P39705 PIB2YGL023C 1908 nt11.95□□□□□ -0.5
NUP60P39705 UBX6YJL048C 1191 nt11.93□□□□□ -0.5
NUP60P39705 YCL042WYCL042W 360 nt11.92□□□□□ -0.5
NUP60P39705 GIS3YLR094C 1509 nt11.87□□□□□ -0.51
NUP60P39705 FMT1YBL013W 1206 nt11.87□□□□□ -0.51
NUP60P39705 SOR2YDL246C 1074 nt11.86□□□□□ -0.51
NUP60P39705 SOR1YJR159W 1074 nt11.86□□□□□ -0.51
NUP60P39705 PTH1YHR189W 573 nt11.85□□□□□ -0.51
NUP60P39705 UME6YDR207C 2511 nt11.83□□□□□ -0.52
NUP60P39705 YIL100WYIL100W 354 nt11.82□□□□□ -0.52
NUP60P39705 YLR235CYLR235C 399 nt11.82□□□□□ -0.52
NUP60P39705 FMP52YER004W 696 nt11.81□□□□□ -0.52
NUP60P39705 YKL030WYKL030W 606 nt11.81□□□□□ -0.52
NUP60P39705 YDR094WYDR094W 336 nt11.77□□□□□ -0.53
NUP60P39705 YSC84YHR016C 1407 nt11.76□□□□□ -0.53
NUP60P39705 CWP1YKL096W 720 nt11.75□□□□□ -0.53
NUP60P39705 RTF1YGL244W 1677 nt11.74□□□□□ -0.53
NUP60P39705 LCB1YMR296C 1677 nt11.71□□□□□ -0.53
NUP60P39705 ADH2YMR303C 1047 nt11.7□□□□□ -0.54
NUP60P39705 YHL050CYHL050C 2094 nt11.65□□□□□ -0.54
NUP60P39705 BOR1YNL275W 1731 nt11.63□□□□□ -0.55
NUP60P39705 PCM1YEL058W 1674 nt11.61□□□□□ -0.55
NUP60P39705 PTK1YKL198C 1989 nt11.61□□□□□ -0.55
NUP60P39705 SNF6YHL025W 999 nt11.6□□□□□ -0.55
NUP60P39705 DIC1YLR348C 897 nt11.6□□□□□ -0.55
NUP60P39705 TIM23YNR017W 669 nt11.6□□□□□ -0.55
NUP60P39705 RRT12YCR045C 1476 nt11.57□□□□□ -0.56
NUP60P39705 YNL195CYNL195C 786 nt11.56□□□□□ -0.56
NUP60P39705 YFL015W-AYFL015W-A 318 nt11.55□□□□□ -0.56
NUP60P39705 BOP3YNL042W 1191 nt11.55□□□□□ -0.56
NUP60P39705 YLR179CYLR179C 606 nt11.53□□□□□ -0.56
NUP60P39705 tL(GAG)GtL(GAG)G 82 nt11.52□□□□□ -0.57
NUP60P39705 RNQ1YCL028W 1218 nt11.52□□□□□ -0.57
NUP60P39705 YIH1YCR059C 777 nt11.5□□□□□ -0.57
NUP60P39705 YPR064WYPR064W 420 nt11.48□□□□□ -0.57
NUP60P39705 YFR018CYFR018C 1092 nt11.45□□□□□ -0.58
NUP60P39705 TAD3YLR316C 969 nt11.41□□□□□ -0.58
NUP60P39705 PAU16YKL224C 372 nt11.4□□□□□ -0.58
NUP60P39705 MCH5YOR306C 1566 nt11.4□□□□□ -0.58
NUP60P39705 RRT5YFR032C 870 nt11.39□□□□□ -0.59
NUP60P39705 AHT1YHR093W 549 nt11.39□□□□□ -0.59
NUP60P39705 WSC2YNL283C 1512 nt11.39□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms