Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 MRPL8YJL063C 717 nt10.04□□□□□ -0.8
RPB9P27999 ALF1YNL148C 765 nt10.02□□□□□ -0.81
RPB9P27999 YPR011CYPR011C 981 nt10.02□□□□□ -0.81
RPB9P27999 YLR236CYLR236C 324 nt10.01□□□□□ -0.81
RPB9P27999 YJL152WYJL152W 360 nt9.93□□□□□ -0.82
RPB9P27999 ADO1YJR105W 1023 nt9.91□□□□□ -0.82
RPB9P27999 IDH1YNL037C 1083 nt9.89□□□□□ -0.83
RPB9P27999 ERV46YAL042W 1248 nt9.88□□□□□ -0.83
RPB9P27999 YDR095CYDR095C 411 nt9.86□□□□□ -0.83
RPB9P27999 YPS1YLR120C 1710 nt9.86□□□□□ -0.83
RPB9P27999 LPX1YOR084W 1164 nt9.84□□□□□ -0.83
RPB9P27999 SIS1YNL007C 1059 nt9.82□□□□□ -0.84
RPB9P27999 YEL076C-AYEL076C-A 651 nt9.81□□□□□ -0.84
RPB9P27999 YEL076CYEL076C 651 nt9.81□□□□□ -0.84
RPB9P27999 YLR464WYLR464W 651 nt9.81□□□□□ -0.84
RPB9P27999 YDR433WYDR433W 441 nt9.79□□□□□ -0.84
RPB9P27999 YKR040CYKR040C 504 nt9.77□□□□□ -0.85
RPB9P27999 YHR165W-AYHR165W-A 312 nt9.75□□□□□ -0.85
RPB9P27999 SPP1YPL138C 1062 nt9.74□□□□□ -0.85
RPB9P27999 GBP2YCL011C 1284 nt9.73□□□□□ -0.85
RPB9P27999 RTG1YOL067C 534 nt9.72□□□□□ -0.85
RPB9P27999 TIR4YOR009W 1464 nt9.71□□□□□ -0.86
RPB9P27999 RPP2AYOL039W 321 nt9.69□□□□□ -0.86
RPB9P27999 UBX6YJL048C 1191 nt9.66□□□□□ -0.86
RPB9P27999 CAC2YML102W 1407 nt9.65□□□□□ -0.86
RPB9P27999 YCL048W-AYCL048W-A 240 nt9.64□□□□□ -0.87
RPB9P27999 PET9YBL030C 957 nt9.63□□□□□ -0.87
RPB9P27999 HUA1YGR268C 597 nt9.62□□□□□ -0.87
RPB9P27999 MXR2YCL033C 507 nt9.62□□□□□ -0.87
RPB9P27999 ART5YGR068C 1761 nt9.6□□□□□ -0.87
RPB9P27999 TCD2YKL027W 1344 nt9.59□□□□□ -0.87
RPB9P27999 YMR057CYMR057C 372 nt9.57□□□□□ -0.88
RPB9P27999 PTP1YDL230W 1008 nt9.55□□□□□ -0.88
RPB9P27999 MEP2YNL142W 1500 nt9.53□□□□□ -0.88
RPB9P27999 YDR094WYDR094W 336 nt9.52□□□□□ -0.89
RPB9P27999 GFD2YCL036W 1701 nt9.51□□□□□ -0.89
RPB9P27999 FRD1YEL047C 1413 nt9.46□□□□□ -0.9
RPB9P27999 YCL042WYCL042W 360 nt9.43□□□□□ -0.9
RPB9P27999 DED1YOR204W 1815 nt9.42□□□□□ -0.9
RPB9P27999 YLR235CYLR235C 399 nt9.42□□□□□ -0.9
RPB9P27999 RRD1YIL153W 1182 nt9.41□□□□□ -0.9
RPB9P27999 YKL030WYKL030W 606 nt9.41□□□□□ -0.9
RPB9P27999 FPS1YLL043W 2010 nt9.39□□□□□ -0.91
RPB9P27999 SPT5YML010W 3192 nt9.38□□□□□ -0.91
RPB9P27999 SOR2YDL246C 1074 nt9.37□□□□□ -0.91
RPB9P27999 SOR1YJR159W 1074 nt9.37□□□□□ -0.91
RPB9P27999 YFL015W-AYFL015W-A 318 nt9.36□□□□□ -0.91
RPB9P27999 PTH1YHR189W 573 nt9.36□□□□□ -0.91
RPB9P27999 DCW1YKL046C 1350 nt9.34□□□□□ -0.91
RPB9P27999 RTS2YOR077W 699 nt9.33□□□□□ -0.92
RPB9P27999 FMP52YER004W 696 nt9.32□□□□□ -0.92
RPB9P27999 CUE1YMR264W 612 nt9.31□□□□□ -0.92
RPB9P27999 LCB1YMR296C 1677 nt9.29□□□□□ -0.92
RPB9P27999 FMT1YBL013W 1206 nt9.29□□□□□ -0.92
RPB9P27999 EMI2YDR516C 1503 nt9.29□□□□□ -0.92
RPB9P27999 YMR090WYMR090W 684 nt9.28□□□□□ -0.92
RPB9P27999 IRC15YPL017C 1500 nt9.26□□□□□ -0.93
RPB9P27999 YDL221WYDL221W 552 nt9.26□□□□□ -0.93
RPB9P27999 Q0182Q0182 405 nt9.24□□□□□ -0.93
RPB9P27999 YIL100WYIL100W 354 nt9.23□□□□□ -0.93
RPB9P27999 CWP1YKL096W 720 nt9.22□□□□□ -0.93
RPB9P27999 tL(GAG)GtL(GAG)G 82 nt9.21□□□□□ -0.94
RPB9P27999 TIM23YNR017W 669 nt9.19□□□□□ -0.94
RPB9P27999 GIS3YLR094C 1509 nt9.19□□□□□ -0.94
RPB9P27999 YFR018CYFR018C 1092 nt9.18□□□□□ -0.94
RPB9P27999 RRT5YFR032C 870 nt9.18□□□□□ -0.94
RPB9P27999 ADH2YMR303C 1047 nt9.16□□□□□ -0.94
RPB9P27999 PAU16YKL224C 372 nt9.15□□□□□ -0.94
RPB9P27999 DIC1YLR348C 897 nt9.15□□□□□ -0.94
RPB9P27999 YPR064WYPR064W 420 nt9.13□□□□□ -0.95
RPB9P27999 SNF6YHL025W 999 nt9.12□□□□□ -0.95
RPB9P27999 YLR179CYLR179C 606 nt9.12□□□□□ -0.95
RPB9P27999 PCM1YEL058W 1674 nt9.09□□□□□ -0.95
RPB9P27999 SCC4YER147C 1875 nt9.08□□□□□ -0.96
RPB9P27999 NVJ2YPR091C 2313 nt9.08□□□□□ -0.96
RPB9P27999 PAC11YDR488C 1602 nt9.08□□□□□ -0.96
RPB9P27999 TAD3YLR316C 969 nt9.07□□□□□ -0.96
RPB9P27999 RNQ1YCL028W 1218 nt9.07□□□□□ -0.96
RPB9P27999 SDH1YKL148C 1923 nt9.07□□□□□ -0.96
RPB9P27999 SBA1YKL117W 651 nt9.05□□□□□ -0.96
RPB9P27999 YIH1YCR059C 777 nt9.04□□□□□ -0.96
RPB9P27999 AHT1YHR093W 549 nt9.02□□□□□ -0.97
RPB9P27999 PRE6YOL038W 765 nt9.02□□□□□ -0.97
RPB9P27999 YNL195CYNL195C 786 nt9.01□□□□□ -0.97
RPB9P27999 WSC2YNL283C 1512 nt8.99□□□□□ -0.97
RPB9P27999 AQY1YPR192W 918 nt8.98□□□□□ -0.97
RPB9P27999 YBR220CYBR220C 1683 nt8.97□□□□□ -0.97
RPB9P27999 PEX25YPL112C 1185 nt8.94□□□□□ -0.98
RPB9P27999 NAT4YMR069W 858 nt8.93□□□□□ -0.98
RPB9P27999 YLL053CYLL053C 459 nt8.91□□□□□ -0.98
RPB9P27999 SSA4YER103W 1929 nt8.9□□□□□ -0.98
RPB9P27999 YFL066CYFL066C 1179 nt8.9□□□□□ -0.98
RPB9P27999 YSC84YHR016C 1407 nt8.89□□□□□ -0.99
RPB9P27999 FTR1YER145C 1215 nt8.89□□□□□ -0.99
RPB9P27999 GLK1YCL040W 1503 nt8.88□□□□□ -0.99
RPB9P27999 YLR415CYLR415C 339 nt8.87□□□□□ -0.99
RPB9P27999 BDH1YAL060W 1149 nt8.86□□□□□ -0.99
RPB9P27999 BIO4YNR057C 714 nt8.86□□□□□ -0.99
RPB9P27999 YSP3YOR003W 1437 nt8.86□□□□□ -0.99
RPB9P27999 SIM1YIL123W 1431 nt8.85□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms