Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AC026691.1-201ENST00000602502 2017 ntBASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 BANF1P1-201ENST00000553684 263 ntBASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AL079307.3-201ENST00000556114 283 ntBASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AC009407.1-201ENST00000568958 598 ntBASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AC008738.7-201ENST00000609744 511 ntBASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AL391005.1-201ENST00000623953 2435 ntBASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
NPIPA1Q9UND3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 GK-202ENST00000378941 458 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SPTLC1P1-201ENST00000447199 261 ntBASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 AC009477.1-201ENST00000452936 217 ntBASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SPDYE22P-201ENST00000582158 798 ntBASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 AL133215.2-201ENST00000609242 977 ntBASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 AL844908.2-201ENST00000609461 460 ntBASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 AC025048.6-201ENST00000634326 1161 ntBASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 AC006449.6-201ENST00000612330 2296 ntBASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA1Q9UND3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms