Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.56■□□□□ 0.08
NDE1Q9NXR1 AC097493.4-201ENST00000641197 219 ntBASIC15.56■□□□□ 0.08
NDE1Q9NXR1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 PI4KAP1-204ENST00000612579 1703 ntBASIC15.56■□□□□ 0.08
NDE1Q9NXR1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 AC090616.6-203ENST00000579186 1945 ntBASIC15.56■□□□□ 0.08
NDE1Q9NXR1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 BX005266.1-201ENST00000473402 457 ntBASIC15.55■□□□□ 0.08
NDE1Q9NXR1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 AC022616.7-201ENST00000525383 220 ntBASIC15.55■□□□□ 0.08
NDE1Q9NXR1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDE1Q9NXR1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 AC012306.2-201ENST00000609350 630 ntBASIC15.54■□□□□ 0.08
NDE1Q9NXR1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NDE1Q9NXR1 MROH4P-201ENST00000431302 1578 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms