Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 TSPY19P-201ENST00000418461 509 ntBASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 TSPY18P-201ENST00000441642 509 ntBASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 KRT18P34-201ENST00000488218 1270 ntBASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMBRD1Q9NUN5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 KRT18P21-201ENST00000515767 1272 ntBASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 AC109635.5-201ENST00000533593 962 ntBASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 CLEC4GP1-201ENST00000596555 870 ntBASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMBRD1Q9NUN5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 AP002414.3-201ENST00000589352 1468 ntBASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 AC041040.2-201ENST00000622926 2899 ntBASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 CICP14-201ENST00000629111 2732 ntBASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMBRD1Q9NUN5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 AL513480.1-201ENST00000451731 511 ntBASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.33■□□□□ 0.52
LMBRD1Q9NUN5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms