Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.5■□□□□ 0.87
SMC4Q9NTJ3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 AL139384.1-201ENST00000612143 3047 ntBASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 SPDYE17-201ENST00000412399 783 ntBASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 KLF2P3-201ENST00000451977 1087 ntBASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 AC051619.7-201ENST00000568314 623 ntBASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 AC015911.4-201ENST00000588022 1070 ntBASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 SPDYE12P-201ENST00000618416 771 ntBASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SMC4Q9NTJ3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 CETN4P-206ENST00000642099 2168 ntBASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 AL080243.2-201ENST00000418783 582 ntBASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 AL450472.2-201ENST00000603663 1156 ntBASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 HYMAI-201ENST00000635591 3347 ntBASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC4Q9NTJ3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 AC046158.3-201ENST00000624947 2558 ntBASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 HIST3H2BA-201ENST00000436555 524 ntBASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 FAM86GP-201ENST00000448322 971 ntBASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMC4Q9NTJ3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms