Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC4CQ9HCJ2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 CXCL1P1-201ENST00000502804 216 ntBASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 AC005593.1-201ENST00000624894 515 ntBASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC4CQ9HCJ2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC4CQ9HCJ2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.46■□□□□ 0.22
LRRC4CQ9HCJ2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC4CQ9HCJ2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC4CQ9HCJ2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 AC011477.6-201ENST00000604980 1927 ntBASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 AC007686.3-201ENST00000619017 3487 ntBASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 GPX1P2-201ENST00000429271 606 ntBASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 AL031432.2-201ENST00000566714 459 ntBASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 AL928711.1-201ENST00000570165 459 ntBASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 AC104581.4-201ENST00000623126 3052 ntBASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC4CQ9HCJ2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms