Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC079776.1-201ENST00000401540 1152 ntBASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC112492.5-201ENST00000421897 457 ntBASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC244107.1-201ENST00000442033 332 ntBASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 SNX29P1-201ENST00000548357 1007 ntBASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AL365223.1-201ENST00000574864 1297 ntBASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC009090.5-201ENST00000624886 2285 ntBASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AL607033.1-201ENST00000623900 1599 ntBASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-3Q9BYR4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 TNRC18P3-201ENST00000441896 2691 ntBASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 AC024909.3-201ENST00000611513 2257 ntBASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 KRT8P37-201ENST00000451609 1420 ntBASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 MSTO2P-201ENST00000314835 1709 ntBASIC5.41□□□□□ -1.54
KRTAP4-3Q9BYR4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms