Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.77■□□□□ 0.11
COL25A1Q9BXS0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL25A1Q9BXS0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL25A1Q9BXS0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL25A1Q9BXS0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL25A1Q9BXS0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AC133963.1-201ENST00000504166 1679 ntBASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AL137077.2-201ENST00000635124 1608 ntBASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AL354751.1-201ENST00000412768 1863 ntBASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 NDUFS6P1-201ENST00000485187 316 ntBASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 GAPDHP40-201ENST00000505218 1006 ntBASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AC027237.1-201ENST00000560942 655 ntBASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 MED11-202ENST00000573708 802 ntTSL 2 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.76■□□□□ 0.11
COL25A1Q9BXS0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 DKKL1P1-201ENST00000400550 698 ntBASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 AC083801.1-201ENST00000491689 358 ntBASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 CR383656.3-201ENST00000551315 183 ntBASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 AC093752.3-201ENST00000567343 901 ntBASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 AC148477.4-201ENST00000613430 1793 ntBASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL25A1Q9BXS0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms