Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 MIR4321-201ENST00000592276 80 ntBASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 CEND1P1-201ENST00000451006 455 ntBASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AC079140.1-201ENST00000508039 487 ntBASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AC105233.2-201ENST00000523697 349 ntBASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 FAM86C2P-203ENST00000528684 1004 ntBASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AF228730.5-201ENST00000530288 346 ntBASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AC026120.1-201ENST00000611536 926 ntBASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AC008267.7-201ENST00000624570 1194 ntBASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 AC134407.2-201ENST00000625089 1978 ntBASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.11■□□□□ 0.01
YIPF4Q9BSR8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms