Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG4P5Q96PW8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG4P5Q96PW8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG4P5Q96PW8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG4P5Q96PW8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG4P5Q96PW8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CSPG4P5Q96PW8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG4P5Q96PW8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 AC097359.3-201ENST00000603982 1210 ntBASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 Z92544.3-201ENST00000624747 417 ntBASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 AC020658.6-201ENST00000623564 1870 ntBASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG4P5Q96PW8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 KRT8P12-202ENST00000472924 1397 ntBASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 AL079307.3-201ENST00000556114 283 ntBASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms