Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM43Q96BQ3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 NKAIN1P1-201ENST00000435754 582 ntBASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 CNN2P10-201ENST00000443067 918 ntBASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 FTLP10-202ENST00000505798 471 ntBASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 CU633904.3-201ENST00000624042 1029 ntBASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM43Q96BQ3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 SPTLC1P5-201ENST00000450718 252 ntBASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 AP001505.2-201ENST00000616815 443 ntBASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 MIR7845-201ENST00000618396 99 ntBASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 HLA-A-202ENST00000376806 1854 ntBASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM43Q96BQ3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 AL023775.1-201ENST00000454907 1746 ntBASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 AC044849.1-201ENST00000519737 1188 ntBASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms