Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 HILS1-202ENST00000545329 423 ntBASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 TIMM17BP1-201ENST00000545713 516 ntBASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 AC123567.1-201ENST00000548294 1261 ntBASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 AC099568.2-201ENST00000609194 695 ntBASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 REXO1L1P-202ENST00000608646 1974 ntBASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 AL118508.1-201ENST00000613502 2345 ntBASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
ATP6V0A1Q93050 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 CYP2T1P-202ENST00000641596 2535 ntBASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP6V0A1Q93050 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 AC011477.6-201ENST00000604980 1927 ntBASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP6V0A1Q93050 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms