Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 CNN2P10-201ENST00000443067 918 ntBASIC19.14■□□□□ 0.65
SNED1Q8TER0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 MIR3619-201ENST00000579667 83 ntBASIC19.14■□□□□ 0.65
SNED1Q8TER0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 HOMER2P2-201ENST00000451621 847 ntBASIC19.13■□□□□ 0.65
SNED1Q8TER0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNED1Q8TER0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.13■□□□□ 0.65
SNED1Q8TER0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 RNU1-114P-201ENST00000365297 166 ntBASIC19.12■□□□□ 0.65
SNED1Q8TER0 MIR1202-201ENST00000408529 83 ntBASIC19.12■□□□□ 0.65
SNED1Q8TER0 CD8B2-202ENST00000417670 633 ntBASIC19.12■□□□□ 0.65
SNED1Q8TER0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 AC079328.1-201ENST00000560358 952 ntBASIC19.12■□□□□ 0.65
SNED1Q8TER0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 AC015818.8-201ENST00000587907 1519 ntBASIC19.12■□□□□ 0.65
SNED1Q8TER0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 KRT8P19-201ENST00000551916 1455 ntBASIC19.12■□□□□ 0.65
SNED1Q8TER0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SNED1Q8TER0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNED1Q8TER0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 KRT8P35-201ENST00000483942 1338 ntBASIC19.11■□□□□ 0.65
SNED1Q8TER0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 ME2P1-201ENST00000426028 1970 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms