Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 AC011495.1-201ENST00000498085 584 ntBASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.77■□□□□ 0.28
SHKBP1Q8TBC3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHKBP1Q8TBC3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 RN7SL837P-201ENST00000463010 287 ntBASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 POU5F1P6-201ENST00000466990 990 ntBASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 AC093726.1-201ENST00000608064 963 ntBASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHKBP1Q8TBC3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms