Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 FO538757.1-201ENST00000623083 1397 ntBASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 AL158211.3-201ENST00000607385 239 ntBASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 SPDYE12P-201ENST00000618416 771 ntBASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 AC073592.8-201ENST00000624126 511 ntBASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC148Q8NFR7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 KRT8P12-202ENST00000472924 1397 ntBASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 AC010491.1-201ENST00000563101 2797 ntBASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 AL365203.3-201ENST00000609742 2057 ntBASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC148Q8NFR7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 REXO1L1P-202ENST00000608646 1974 ntBASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 AL080243.2-201ENST00000418783 582 ntBASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 SERBP1P3-201ENST00000459980 809 ntBASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC148Q8NFR7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms