Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 RNA5SP486-201ENST00000515961 83 ntBASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 MIR4741-201ENST00000579822 90 ntBASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 AC006453.4-201ENST00000636949 1252 ntBASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 KRT8P35-201ENST00000483942 1338 ntBASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.4■□□□□ 0.38
KLHDC9Q8NEP7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KLHDC9Q8NEP7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 AL138799.1-201ENST00000448213 1675 ntBASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 HOMER2P2-201ENST00000451621 847 ntBASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 IGHJ2P-201ENST00000454480 60 ntBASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 RPSAP36-202ENST00000494591 1261 ntBASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 AC244452.3-201ENST00000636814 210 ntBASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KLHDC9Q8NEP7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 MIR1202-201ENST00000408529 83 ntBASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 AC004898.1-201ENST00000451057 766 ntBASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 AP006547.1-201ENST00000563435 692 ntBASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KLHDC9Q8NEP7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms