Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 AC007950.2-201ENST00000615045 2347 ntBASIC14.02□□□□□ -0.16
CPEB3Q8NE35 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 AP001282.1-201ENST00000531301 1499 ntBASIC14.02□□□□□ -0.16
CPEB3Q8NE35 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 AL353705.2-201ENST00000428243 662 ntBASIC14.02□□□□□ -0.17
CPEB3Q8NE35 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 AC092183.1-201ENST00000469884 875 ntBASIC14.02□□□□□ -0.17
CPEB3Q8NE35 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.02□□□□□ -0.17
CPEB3Q8NE35 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 AC025678.2-201ENST00000562061 970 ntBASIC14.02□□□□□ -0.17
CPEB3Q8NE35 AC105021.1-202ENST00000570572 669 ntBASIC14.02□□□□□ -0.17
CPEB3Q8NE35 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 MIR6080-201ENST00000617359 66 ntBASIC14.02□□□□□ -0.17
CPEB3Q8NE35 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPEB3Q8NE35 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 BNIP3P1-202ENST00000550043 1585 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 SPDYE7P-202ENST00000420373 878 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AL139010.1-201ENST00000454878 894 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC069262.1-201ENST00000539058 672 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC243562.2-201ENST00000561247 970 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC026979.3-201ENST00000607315 403 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC007967.4-201ENST00000614700 386 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 PAUPAR-201ENST00000630360 2965 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AP003680.1-201ENST00000598970 3660 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC007326.2-201ENST00000624224 7579 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms