Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PHKG1P2-201ENST00000457537 863 ntBASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 AL450472.2-201ENST00000603663 1156 ntBASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AC023157.3-201ENST00000619086 2088 ntBASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AC005237.2-201ENST00000434368 219 ntBASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 ALG1L8P-201ENST00000533887 760 ntBASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 BANF1P1-201ENST00000553684 263 ntBASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 AC026979.3-201ENST00000607315 403 ntBASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD1LQ86WJ1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 AC138035.3-201ENST00000622706 2791 ntBASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 AC112693.3-201ENST00000624819 1983 ntBASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 GPS2P2-201ENST00000430745 888 ntBASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 AC011270.2-201ENST00000624293 2550 ntBASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 AC127383.1-201ENST00000444697 1800 ntBASIC19.72■□□□□ 0.75
CHD1LQ86WJ1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD1LQ86WJ1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD1LQ86WJ1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHD1LQ86WJ1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD1LQ86WJ1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHD1LQ86WJ1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD1LQ86WJ1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CHD1LQ86WJ1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms