Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 AC002056.1-201ENST00000395613 760 ntBASIC16.38■□□□□ 0.21
CASC4Q6P4E1 AC245100.5-201ENST00000452108 331 ntBASIC16.38■□□□□ 0.21
CASC4Q6P4E1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 RNA5SP416-201ENST00000516838 111 ntBASIC16.38■□□□□ 0.21
CASC4Q6P4E1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 AC002347.1-201ENST00000569543 541 ntBASIC16.38■□□□□ 0.21
CASC4Q6P4E1 AL513190.1-201ENST00000621254 727 ntBASIC16.38■□□□□ 0.21
CASC4Q6P4E1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASC4Q6P4E1 CICP13-201ENST00000422015 2789 ntBASIC16.38■□□□□ 0.21
CASC4Q6P4E1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 AC092850.2-201ENST00000623821 2697 ntBASIC16.37■□□□□ 0.21
CASC4Q6P4E1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.37■□□□□ 0.21
CASC4Q6P4E1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 AC112191.1-201ENST00000523689 701 ntBASIC16.37■□□□□ 0.21
CASC4Q6P4E1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 AC104640.1-201ENST00000562617 2109 ntBASIC16.37■□□□□ 0.21
CASC4Q6P4E1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 AC126177.1-201ENST00000547829 2218 ntBASIC16.37■□□□□ 0.21
CASC4Q6P4E1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CASC4Q6P4E1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 AC068418.2-201ENST00000577309 3703 ntBASIC16.36■□□□□ 0.21
CASC4Q6P4E1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 MIR4321-201ENST00000592276 80 ntBASIC16.36■□□□□ 0.21
CASC4Q6P4E1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms