Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKAL1Q5VV42 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 LINC01101-201ENST00000622953 1884 ntBASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AL645939.2-201ENST00000427340 991 ntBASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 SPCS2P4-201ENST00000436160 681 ntBASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AL591424.1-201ENST00000442569 1213 ntBASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AC068418.2-201ENST00000577309 3703 ntBASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKAL1Q5VV42 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDKAL1Q5VV42 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDKAL1Q5VV42 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDKAL1Q5VV42 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 AP002414.2-201ENST00000591780 3365 ntBASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 KRT18P3-201ENST00000451602 1288 ntBASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 RN7SL589P-201ENST00000481268 310 ntBASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 FAM86C2P-203ENST00000528684 1004 ntBASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDKAL1Q5VV42 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 CICP23-201ENST00000605013 2741 ntBASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 ZNF259P1-201ENST00000407656 1365 ntBASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 HLA-H-201ENST00000383620 1096 ntBASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 AL590627.1-203ENST00000421194 1026 ntBASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.44■□□□□ 0.38
CDKAL1Q5VV42 AL139010.1-201ENST00000454878 894 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms