Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC104073.2-201ENST00000453737 312 ntBASIC20.94■□□□□ 0.94
COL16A1Q07092 RN7SL67P-201ENST00000492147 296 ntBASIC20.94■□□□□ 0.94
COL16A1Q07092 AC026410.1-201ENST00000507366 1101 ntBASIC20.94■□□□□ 0.94
COL16A1Q07092 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.94■□□□□ 0.94
COL16A1Q07092 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL16A1Q07092 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.94■□□□□ 0.94
COL16A1Q07092 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC20.94■□□□□ 0.94
COL16A1Q07092 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL16A1Q07092 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.94■□□□□ 0.94
COL16A1Q07092 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.94■□□□□ 0.94
COL16A1Q07092 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL16A1Q07092 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.94■□□□□ 0.94
COL16A1Q07092 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL16A1Q07092 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL16A1Q07092 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL16A1Q07092 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL16A1Q07092 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL16A1Q07092 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
COL16A1Q07092 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 AC079112.1-201ENST00000454972 939 ntBASIC20.93■□□□□ 0.94
COL16A1Q07092 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.93■□□□□ 0.94
COL16A1Q07092 RN7SL596P-201ENST00000582123 288 ntBASIC20.93■□□□□ 0.94
COL16A1Q07092 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC20.93■□□□□ 0.94
COL16A1Q07092 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL16A1Q07092 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.93■□□□□ 0.94
COL16A1Q07092 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL16A1Q07092 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC20.93■□□□□ 0.94
COL16A1Q07092 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 AL132994.2-201ENST00000603120 687 ntBASIC20.93■□□□□ 0.94
COL16A1Q07092 MEG3_2.1-201ENST00000611456 105 ntBASIC20.93■□□□□ 0.94
COL16A1Q07092 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
COL16A1Q07092 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.92■□□□□ 0.94
COL16A1Q07092 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL16A1Q07092 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL16A1Q07092 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.92■□□□□ 0.94
COL16A1Q07092 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL16A1Q07092 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 OR2K2-202ENST00000374428 1038 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL16A1Q07092 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 AC012362.1-201ENST00000434906 739 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 RPL7P35-201ENST00000446943 740 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 RPL18AP3-201ENST00000462885 528 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 NDUFS6P1-201ENST00000485187 316 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC20.92■□□□□ 0.94
COL16A1Q07092 TMCO5B-205ENST00000530020 894 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.92■□□□□ 0.94
COL16A1Q07092 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 AL031713.1-201ENST00000564813 661 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 MIR3677-201ENST00000578964 60 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 RN7SL163P-201ENST00000583100 276 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 EIF5AP2-201ENST00000585668 1047 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC20.92■□□□□ 0.94
COL16A1Q07092 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL16A1Q07092 AC007718.1-201ENST00000621078 280 ntBASIC20.92■□□□□ 0.94
COL16A1Q07092 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC20.92■□□□□ 0.94
COL16A1Q07092 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL16A1Q07092 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL16A1Q07092 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.92■□□□□ 0.94
COL16A1Q07092 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.91■□□□□ 0.94
COL16A1Q07092 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.91■□□□□ 0.94
COL16A1Q07092 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.91■□□□□ 0.94
COL16A1Q07092 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC20.91■□□□□ 0.94
COL16A1Q07092 TUBB8P8-201ENST00000458717 1058 ntBASIC20.91■□□□□ 0.94
COL16A1Q07092 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC20.91■□□□□ 0.94
COL16A1Q07092 ALG1L13P-202ENST00000519320 584 ntBASIC20.91■□□□□ 0.94
COL16A1Q07092 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.91■□□□□ 0.94
COL16A1Q07092 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL16A1Q07092 AL136295.7-201ENST00000619226 1200 ntBASIC20.91■□□□□ 0.94
COL16A1Q07092 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC20.91■□□□□ 0.94
COL16A1Q07092 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms