Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 PHKG1P2-201ENST00000457537 863 ntBASIC13.98□□□□□ -0.17
HIST1H3AP68431 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SPDYE17-201ENST00000412399 783 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC211486.1-202ENST00000416371 468 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 AL353705.2-201ENST00000428243 662 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SPDYE14P-201ENST00000442619 822 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 AP006288.1-201ENST00000446065 395 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC211476.1-201ENST00000503899 468 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC105021.1-202ENST00000570572 669 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 AL450472.2-201ENST00000603663 1156 ntBASIC13.97□□□□□ -0.17
HIST1H3AP68431 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H3AP68431 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H3AP68431 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms