Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.1■□□□□ 0.97
ZC3H6P61129 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ZC3H6P61129 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC21.1■□□□□ 0.97
ZC3H6P61129 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 MIR663B-201ENST00000408361 115 ntBASIC21.1■□□□□ 0.97
ZC3H6P61129 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ZC3H6P61129 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC21.1■□□□□ 0.97
ZC3H6P61129 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.1■□□□□ 0.97
ZC3H6P61129 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC21.1■□□□□ 0.97
ZC3H6P61129 RPSAP36-202ENST00000494591 1261 ntBASIC21.1■□□□□ 0.97
ZC3H6P61129 AP006547.1-201ENST00000563435 692 ntBASIC21.1■□□□□ 0.97
ZC3H6P61129 AC015910.1-201ENST00000579400 975 ntBASIC21.1■□□□□ 0.97
ZC3H6P61129 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 AC016629.1-201ENST00000596579 586 ntBASIC21.1■□□□□ 0.97
ZC3H6P61129 KC6-205ENST00000599934 556 ntTSL 4 BASIC21.1■□□□□ 0.97
ZC3H6P61129 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.1■□□□□ 0.97
ZC3H6P61129 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.1■□□□□ 0.97
ZC3H6P61129 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC21.1■□□□□ 0.97
ZC3H6P61129 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.1■□□□□ 0.97
ZC3H6P61129 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H6P61129 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.09■□□□□ 0.97
ZC3H6P61129 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.09■□□□□ 0.97
ZC3H6P61129 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.09■□□□□ 0.97
ZC3H6P61129 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
ZC3H6P61129 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.09■□□□□ 0.97
ZC3H6P61129 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ZC3H6P61129 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.09■□□□□ 0.97
ZC3H6P61129 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.09■□□□□ 0.97
ZC3H6P61129 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.09■□□□□ 0.97
ZC3H6P61129 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ZC3H6P61129 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC21.09■□□□□ 0.97
ZC3H6P61129 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC21.09■□□□□ 0.97
ZC3H6P61129 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ZC3H6P61129 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZC3H6P61129 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.09■□□□□ 0.97
ZC3H6P61129 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.08■□□□□ 0.97
ZC3H6P61129 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.08■□□□□ 0.97
ZC3H6P61129 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.08■□□□□ 0.97
ZC3H6P61129 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.08■□□□□ 0.97
ZC3H6P61129 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ZC3H6P61129 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.08■□□□□ 0.97
ZC3H6P61129 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.08■□□□□ 0.97
ZC3H6P61129 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC21.08■□□□□ 0.97
ZC3H6P61129 MTX1P1-201ENST00000440904 838 ntBASIC21.08■□□□□ 0.97
ZC3H6P61129 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 HIST2H2BC-201ENST00000498492 580 ntBASIC21.08■□□□□ 0.97
ZC3H6P61129 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZC3H6P61129 AC012313.1-201ENST00000593393 3059 ntBASIC21.08■□□□□ 0.97
ZC3H6P61129 AP005019.2-201ENST00000615104 511 ntBASIC21.08■□□□□ 0.97
ZC3H6P61129 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ZC3H6P61129 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
ZC3H6P61129 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZC3H6P61129 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
ZC3H6P61129 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ZC3H6P61129 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZC3H6P61129 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZC3H6P61129 ALOX12P2-203ENST00000570921 1945 ntBASIC21.08■□□□□ 0.96
ZC3H6P61129 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ZC3H6P61129 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
ZC3H6P61129 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ZC3H6P61129 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.07■□□□□ 0.96
ZC3H6P61129 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZC3H6P61129 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.07■□□□□ 0.96
ZC3H6P61129 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms