Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
VSX2P58304 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.34■□□□□ 0.05
VSX2P58304 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
VSX2P58304 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
VSX2P58304 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 MTHFR-217ENST00000641820 1569 ntBASIC15.34■□□□□ 0.05
VSX2P58304 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 SPDYE17-201ENST00000412399 783 ntBASIC15.34■□□□□ 0.05
VSX2P58304 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.34■□□□□ 0.05
VSX2P58304 TSSK5P-201ENST00000423978 907 ntBASIC15.34■□□□□ 0.05
VSX2P58304 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 AJ011932.1-201ENST00000621707 465 ntBASIC15.34■□□□□ 0.05
VSX2P58304 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.34■□□□□ 0.05
VSX2P58304 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VSX2P58304 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
VSX2P58304 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.34■□□□□ 0.05
VSX2P58304 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VSX2P58304 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
VSX2P58304 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
VSX2P58304 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VSX2P58304 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VSX2P58304 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
VSX2P58304 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
VSX2P58304 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
VSX2P58304 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.33■□□□□ 0.05
VSX2P58304 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.33■□□□□ 0.04
VSX2P58304 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
VSX2P58304 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 AC004987.2-201ENST00000395959 1148 ntBASIC15.33■□□□□ 0.04
VSX2P58304 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
VSX2P58304 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.33■□□□□ 0.04
VSX2P58304 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.33■□□□□ 0.04
VSX2P58304 FAM8A3P-201ENST00000427218 844 ntBASIC15.33■□□□□ 0.04
VSX2P58304 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.33■□□□□ 0.04
VSX2P58304 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.33■□□□□ 0.04
VSX2P58304 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.33■□□□□ 0.04
VSX2P58304 SERBP1P3-201ENST00000459980 809 ntBASIC15.33■□□□□ 0.04
VSX2P58304 AC004890.2-204ENST00000481968 304 ntBASIC15.33■□□□□ 0.04
VSX2P58304 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.33■□□□□ 0.04
VSX2P58304 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.33■□□□□ 0.04
VSX2P58304 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.33■□□□□ 0.04
VSX2P58304 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.33■□□□□ 0.04
VSX2P58304 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.33■□□□□ 0.04
VSX2P58304 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.33■□□□□ 0.04
VSX2P58304 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VSX2P58304 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.33■□□□□ 0.04
VSX2P58304 AC092364.2-202ENST00000597012 1073 ntBASIC15.33■□□□□ 0.04
VSX2P58304 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
VSX2P58304 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VSX2P58304 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 AC087499.5-201ENST00000452760 1342 ntBASIC15.33■□□□□ 0.04
VSX2P58304 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
VSX2P58304 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
VSX2P58304 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.33■□□□□ 0.04
VSX2P58304 AC134407.2-201ENST00000625089 1978 ntBASIC15.33■□□□□ 0.04
VSX2P58304 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
VSX2P58304 FLJ16779-201ENST00000612722 7638 ntBASIC15.33■□□□□ 0.04
VSX2P58304 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
VSX2P58304 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
VSX2P58304 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VSX2P58304 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms