Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN2P57739 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CLDN2P57739 TMEM14DP-201ENST00000422205 345 ntBASIC15.73■□□□□ 0.11
CLDN2P57739 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN2P57739 TTTY23B-201ENST00000442790 549 ntBASIC15.73■□□□□ 0.11
CLDN2P57739 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN2P57739 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN2P57739 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN2P57739 RN7SL399P-201ENST00000471648 279 ntBASIC15.73■□□□□ 0.11
CLDN2P57739 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN2P57739 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN2P57739 IGHV3-71-201ENST00000523324 359 ntBASIC15.73■□□□□ 0.11
CLDN2P57739 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN2P57739 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.73■□□□□ 0.11
CLDN2P57739 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN2P57739 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN2P57739 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN2P57739 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CLDN2P57739 TMEM261P1-201ENST00000604899 340 ntBASIC15.73■□□□□ 0.11
CLDN2P57739 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN2P57739 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN2P57739 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CLDN2P57739 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN2P57739 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN2P57739 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CLDN2P57739 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN2P57739 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN2P57739 AC018892.3-201ENST00000623986 2499 ntBASIC15.72■□□□□ 0.11
CLDN2P57739 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN2P57739 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN2P57739 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLDN2P57739 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLDN2P57739 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN2P57739 AC007274.1-201ENST00000439805 662 ntBASIC15.72■□□□□ 0.11
CLDN2P57739 PHKG1P2-201ENST00000457537 863 ntBASIC15.72■□□□□ 0.11
CLDN2P57739 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN2P57739 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
CLDN2P57739 AL359881.2-201ENST00000602973 570 ntBASIC15.72■□□□□ 0.11
CLDN2P57739 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 TNRC18P3-201ENST00000441896 2691 ntBASIC15.72■□□□□ 0.11
CLDN2P57739 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN2P57739 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN2P57739 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.72■□□□□ 0.11
CLDN2P57739 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN2P57739 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLDN2P57739 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN2P57739 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 PCDHB19P-201ENST00000570871 2371 ntBASIC15.71■□□□□ 0.11
CLDN2P57739 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLDN2P57739 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLDN2P57739 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CLDN2P57739 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CLDN2P57739 AC112492.5-201ENST00000421897 457 ntBASIC15.71■□□□□ 0.11
CLDN2P57739 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN2P57739 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN2P57739 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN2P57739 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.71■□□□□ 0.11
CLDN2P57739 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN2P57739 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN2P57739 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.71■□□□□ 0.11
CLDN2P57739 AC092552.1-201ENST00000547243 906 ntBASIC15.71■□□□□ 0.11
CLDN2P57739 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN2P57739 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN2P57739 AL391069.4-201ENST00000609583 481 ntBASIC15.71■□□□□ 0.11
CLDN2P57739 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN2P57739 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN2P57739 AL033527.5-201ENST00000641382 801 ntBASIC15.71■□□□□ 0.11
CLDN2P57739 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN2P57739 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN2P57739 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.71■□□□□ 0.1
CLDN2P57739 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms