Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
CMC4P56277 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CMC4P56277 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CMC4P56277 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CMC4P56277 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 MIR770-201ENST00000390219 98 ntBASIC11.9□□□□□ -0.5
CMC4P56277 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.9□□□□□ -0.5
CMC4P56277 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.9□□□□□ -0.5
CMC4P56277 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.9□□□□□ -0.5
CMC4P56277 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CMC4P56277 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.9□□□□□ -0.5
CMC4P56277 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.9□□□□□ -0.5
CMC4P56277 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.9□□□□□ -0.5
CMC4P56277 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.9□□□□□ -0.5
CMC4P56277 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 BNIP3P1-202ENST00000550043 1585 ntBASIC11.9□□□□□ -0.5
CMC4P56277 BANF1P1-201ENST00000553684 263 ntBASIC11.9□□□□□ -0.5
CMC4P56277 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CMC4P56277 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.9□□□□□ -0.5
CMC4P56277 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.9□□□□□ -0.5
CMC4P56277 TEX28P1-201ENST00000613479 1221 ntBASIC11.9□□□□□ -0.5
CMC4P56277 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.9□□□□□ -0.5
CMC4P56277 TEX28P2-201ENST00000617764 1221 ntBASIC11.9□□□□□ -0.5
CMC4P56277 AL590560.3-201ENST00000623350 461 ntBASIC11.9□□□□□ -0.5
CMC4P56277 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.9□□□□□ -0.5
CMC4P56277 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 AC067750.1-201ENST00000608826 6545 ntBASIC11.9□□□□□ -0.5
CMC4P56277 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CMC4P56277 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CMC4P56277 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
CMC4P56277 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
CMC4P56277 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
CMC4P56277 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.9□□□□□ -0.51
CMC4P56277 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
CMC4P56277 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CMC4P56277 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.9□□□□□ -0.51
CMC4P56277 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC11.9□□□□□ -0.51
CMC4P56277 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC11.9□□□□□ -0.51
CMC4P56277 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms