Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
GFRA1P56159 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.28□□□□□ -0.12
GFRA1P56159 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.28□□□□□ -0.12
GFRA1P56159 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
GFRA1P56159 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 AC099568.2-201ENST00000609194 695 ntBASIC14.28□□□□□ -0.12
GFRA1P56159 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.28□□□□□ -0.12
GFRA1P56159 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.28□□□□□ -0.12
GFRA1P56159 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 AF228730.6-201ENST00000641497 218 ntBASIC14.28□□□□□ -0.12
GFRA1P56159 AC084121.3-201ENST00000641716 218 ntBASIC14.28□□□□□ -0.12
GFRA1P56159 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.28□□□□□ -0.12
GFRA1P56159 AC105233.6-201ENST00000642093 218 ntBASIC14.28□□□□□ -0.12
GFRA1P56159 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
GFRA1P56159 AC112504.1-201ENST00000623415 1841 ntBASIC14.27□□□□□ -0.12
GFRA1P56159 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GFRA1P56159 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GFRA1P56159 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.27□□□□□ -0.12
GFRA1P56159 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
GFRA1P56159 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.27□□□□□ -0.12
GFRA1P56159 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.27□□□□□ -0.12
GFRA1P56159 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GFRA1P56159 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GFRA1P56159 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
GFRA1P56159 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.27□□□□□ -0.13
GFRA1P56159 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.27□□□□□ -0.13
GFRA1P56159 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 AC087499.6-201ENST00000411576 835 ntBASIC14.27□□□□□ -0.13
GFRA1P56159 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.27□□□□□ -0.13
GFRA1P56159 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GFRA1P56159 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.27□□□□□ -0.13
GFRA1P56159 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.27□□□□□ -0.13
GFRA1P56159 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.27□□□□□ -0.13
GFRA1P56159 AC055876.2-201ENST00000531834 546 ntBASIC14.27□□□□□ -0.13
GFRA1P56159 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GFRA1P56159 TP53TG3HP-202ENST00000569755 579 ntBASIC14.27□□□□□ -0.13
GFRA1P56159 AC027307.3-201ENST00000594262 1100 ntBASIC14.27□□□□□ -0.13
GFRA1P56159 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.27□□□□□ -0.13
GFRA1P56159 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GFRA1P56159 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.27□□□□□ -0.13
GFRA1P56159 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.27□□□□□ -0.13
GFRA1P56159 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
GFRA1P56159 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.27□□□□□ -0.13
GFRA1P56159 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
GFRA1P56159 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 AL607033.1-201ENST00000623900 1599 ntBASIC14.26□□□□□ -0.13
GFRA1P56159 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.26□□□□□ -0.13
GFRA1P56159 AC024909.3-201ENST00000611513 2257 ntBASIC14.26□□□□□ -0.13
GFRA1P56159 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GFRA1P56159 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GFRA1P56159 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.26□□□□□ -0.13
GFRA1P56159 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.26□□□□□ -0.13
GFRA1P56159 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.26□□□□□ -0.13
GFRA1P56159 TOMM22P5-201ENST00000416399 439 ntBASIC14.26□□□□□ -0.13
GFRA1P56159 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.26□□□□□ -0.13
GFRA1P56159 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 SLED1-202ENST00000512051 380 ntBASIC14.26□□□□□ -0.13
GFRA1P56159 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GFRA1P56159 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.26□□□□□ -0.13
GFRA1P56159 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GFRA1P56159 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.26□□□□□ -0.13
GFRA1P56159 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.26□□□□□ -0.13
GFRA1P56159 RRP7BP-205ENST00000566851 833 ntBASIC14.26□□□□□ -0.13
GFRA1P56159 AC140912.1-201ENST00000577171 1054 ntBASIC14.26□□□□□ -0.13
GFRA1P56159 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
GFRA1P56159 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.26□□□□□ -0.13
GFRA1P56159 AL391069.4-201ENST00000609583 481 ntBASIC14.26□□□□□ -0.13
GFRA1P56159 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
GFRA1P56159 AC025048.6-201ENST00000634326 1161 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms