Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NKX2-5P52952 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 AC023024.2-201ENST00000623561 1993 ntBASIC13.62□□□□□ -0.23
NKX2-5P52952 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NKX2-5P52952 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NKX2-5P52952 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX2-5P52952 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 AL591122.2-201ENST00000624125 1853 ntBASIC13.62□□□□□ -0.23
NKX2-5P52952 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX2-5P52952 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-5P52952 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX2-5P52952 WWOX-216ENST00000569818 525 ntBASIC13.62□□□□□ -0.23
NKX2-5P52952 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-5P52952 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NKX2-5P52952 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NKX2-5P52952 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NKX2-5P52952 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX2-5P52952 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX2-5P52952 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 FSCN1P1-201ENST00000568912 1481 ntBASIC13.61□□□□□ -0.23
NKX2-5P52952 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 ZBED1P1-201ENST00000502364 1930 ntBASIC13.61□□□□□ -0.23
NKX2-5P52952 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-5P52952 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.61□□□□□ -0.23
NKX2-5P52952 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 AL050303.2-201ENST00000619798 666 ntBASIC13.61□□□□□ -0.23
NKX2-5P52952 AC009154.2-201ENST00000621177 724 ntBASIC13.61□□□□□ -0.23
NKX2-5P52952 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NKX2-5P52952 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-5P52952 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-5P52952 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-5P52952 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
NKX2-5P52952 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-5P52952 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
NKX2-5P52952 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
NKX2-5P52952 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-5P52952 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-5P52952 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NKX2-5P52952 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX2-5P52952 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX2-5P52952 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX2-5P52952 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
NKX2-5P52952 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-5P52952 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NKX2-5P52952 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-5P52952 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
NKX2-5P52952 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX2-5P52952 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 MIPEPP3-201ENST00000412105 444 ntBASIC13.6□□□□□ -0.23
NKX2-5P52952 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX2-5P52952 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX2-5P52952 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
NKX2-5P52952 AF201337.1-201ENST00000520239 748 ntBASIC13.6□□□□□ -0.23
NKX2-5P52952 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX2-5P52952 AC026271.3-201ENST00000571884 352 ntBASIC13.6□□□□□ -0.23
NKX2-5P52952 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms