Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PSEN1P49768 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.14■□□□□ 0.33
PSEN1P49768 AC073310.1-201ENST00000423226 1033 ntBASIC17.14■□□□□ 0.33
PSEN1P49768 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.14■□□□□ 0.33
PSEN1P49768 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.14■□□□□ 0.33
PSEN1P49768 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.14■□□□□ 0.33
PSEN1P49768 AC051619.7-201ENST00000568314 623 ntBASIC17.14■□□□□ 0.33
PSEN1P49768 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC17.14■□□□□ 0.33
PSEN1P49768 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC17.14■□□□□ 0.33
PSEN1P49768 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 AC106028.4-201ENST00000614509 607 ntBASIC17.14■□□□□ 0.33
PSEN1P49768 MIR6080-201ENST00000617359 66 ntBASIC17.14■□□□□ 0.33
PSEN1P49768 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.14■□□□□ 0.33
PSEN1P49768 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PSEN1P49768 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 AC015656.1-201ENST00000624209 3578 ntBASIC17.14■□□□□ 0.33
PSEN1P49768 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 U82695.1-201ENST00000635752 1889 ntBASIC17.14■□□□□ 0.33
PSEN1P49768 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PSEN1P49768 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.14■□□□□ 0.33
PSEN1P49768 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.13■□□□□ 0.33
PSEN1P49768 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.13■□□□□ 0.33
PSEN1P49768 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.13■□□□□ 0.33
PSEN1P49768 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.13■□□□□ 0.33
PSEN1P49768 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.13■□□□□ 0.33
PSEN1P49768 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
PSEN1P49768 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PSEN1P49768 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.13■□□□□ 0.33
PSEN1P49768 AL589702.1-201ENST00000641229 1509 ntBASIC17.13■□□□□ 0.33
PSEN1P49768 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PSEN1P49768 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.13■□□□□ 0.33
PSEN1P49768 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.13■□□□□ 0.33
PSEN1P49768 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.13■□□□□ 0.33
PSEN1P49768 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.13■□□□□ 0.33
PSEN1P49768 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.13■□□□□ 0.33
PSEN1P49768 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.13■□□□□ 0.33
PSEN1P49768 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC17.13■□□□□ 0.33
PSEN1P49768 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.13■□□□□ 0.33
PSEN1P49768 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.13■□□□□ 0.33
PSEN1P49768 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSEN1P49768 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.13■□□□□ 0.33
PSEN1P49768 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PSEN1P49768 AC008677.1-201ENST00000519230 1561 ntBASIC17.12■□□□□ 0.33
PSEN1P49768 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PSEN1P49768 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.12■□□□□ 0.33
PSEN1P49768 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 KLF2P3-201ENST00000451977 1087 ntBASIC17.12■□□□□ 0.33
PSEN1P49768 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC17.12■□□□□ 0.33
PSEN1P49768 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.12■□□□□ 0.33
PSEN1P49768 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.12■□□□□ 0.33
PSEN1P49768 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PSEN1P49768 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.12■□□□□ 0.33
PSEN1P49768 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 CICP20-201ENST00000443330 2801 ntBASIC17.12■□□□□ 0.33
PSEN1P49768 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PSEN1P49768 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.12■□□□□ 0.33
PSEN1P49768 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms