Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 AL592309.1-201ENST00000443127 649 ntBASIC16.67■□□□□ 0.26
MMP13P45452 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP13P45452 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP13P45452 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.67■□□□□ 0.26
MMP13P45452 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 AL513210.1-201ENST00000629608 234 ntBASIC16.67■□□□□ 0.26
MMP13P45452 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
MMP13P45452 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MMP13P45452 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MMP13P45452 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP13P45452 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP13P45452 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP13P45452 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MMP13P45452 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP13P45452 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP13P45452 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MMP13P45452 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP13P45452 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP13P45452 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP13P45452 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.66■□□□□ 0.26
MMP13P45452 MIR1233-2-201ENST00000408138 82 ntBASIC16.66■□□□□ 0.26
MMP13P45452 MIR1233-1-201ENST00000408722 82 ntBASIC16.66■□□□□ 0.26
MMP13P45452 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.66■□□□□ 0.26
MMP13P45452 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.66■□□□□ 0.26
MMP13P45452 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MMP13P45452 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.66■□□□□ 0.26
MMP13P45452 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.66■□□□□ 0.26
MMP13P45452 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MMP13P45452 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.66■□□□□ 0.26
MMP13P45452 KRT8P23-201ENST00000560090 1207 ntBASIC16.66■□□□□ 0.26
MMP13P45452 LINC01225-203ENST00000563550 1244 ntBASIC16.66■□□□□ 0.26
MMP13P45452 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.66■□□□□ 0.26
MMP13P45452 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
MMP13P45452 TMBIM7P-203ENST00000641617 1718 ntBASIC16.66■□□□□ 0.26
MMP13P45452 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP13P45452 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP13P45452 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP13P45452 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MMP13P45452 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
MMP13P45452 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP13P45452 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP13P45452 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP13P45452 AL589702.1-201ENST00000641229 1509 ntBASIC16.65■□□□□ 0.26
MMP13P45452 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP13P45452 AC138035.3-201ENST00000622706 2791 ntBASIC16.65■□□□□ 0.26
MMP13P45452 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MMP13P45452 AC004461.1-201ENST00000412461 403 ntBASIC16.65■□□□□ 0.26
MMP13P45452 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.65■□□□□ 0.26
MMP13P45452 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.65■□□□□ 0.26
MMP13P45452 AC069335.1-201ENST00000489972 472 ntBASIC16.65■□□□□ 0.26
MMP13P45452 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP13P45452 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.65■□□□□ 0.26
MMP13P45452 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 AP000344.2-201ENST00000512987 629 ntBASIC16.65■□□□□ 0.26
MMP13P45452 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP13P45452 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP13P45452 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms