Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.1□□□□□ -0.31
CEACAM3P40198 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.1□□□□□ -0.31
CEACAM3P40198 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.1□□□□□ -0.31
CEACAM3P40198 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CEACAM3P40198 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CEACAM3P40198 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.1□□□□□ -0.31
CEACAM3P40198 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.1□□□□□ -0.31
CEACAM3P40198 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.1□□□□□ -0.31
CEACAM3P40198 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 OR2I1P-209ENST00000641730 5365 ntBASIC13.1□□□□□ -0.31
CEACAM3P40198 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CEACAM3P40198 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CEACAM3P40198 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.1□□□□□ -0.31
CEACAM3P40198 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CEACAM3P40198 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM3P40198 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 AC004987.2-201ENST00000395959 1148 ntBASIC13.09□□□□□ -0.31
CEACAM3P40198 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.09□□□□□ -0.31
CEACAM3P40198 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 METTL21AP1-201ENST00000438852 635 ntBASIC13.09□□□□□ -0.31
CEACAM3P40198 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.09□□□□□ -0.31
CEACAM3P40198 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM3P40198 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms