Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
SLC6A4P31645 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC6A4P31645 CHCHD2P3-201ENST00000603038 451 ntBASIC16.35■□□□□ 0.21
SLC6A4P31645 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 AC105233.6-201ENST00000642093 218 ntBASIC16.35■□□□□ 0.21
SLC6A4P31645 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC6A4P31645 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 SLC7A15P-201ENST00000424028 1363 ntBASIC16.35■□□□□ 0.21
SLC6A4P31645 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC6A4P31645 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC6A4P31645 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SLC6A4P31645 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A4P31645 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
SLC6A4P31645 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
SLC6A4P31645 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SLC6A4P31645 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SLC6A4P31645 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A4P31645 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC6A4P31645 DFFBP1-201ENST00000433250 979 ntBASIC16.34■□□□□ 0.21
SLC6A4P31645 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 AC093004.1-201ENST00000508850 424 ntBASIC16.34■□□□□ 0.21
SLC6A4P31645 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A4P31645 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A4P31645 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SLC6A4P31645 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SLC6A4P31645 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A4P31645 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A4P31645 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC6A4P31645 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC6A4P31645 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SLC6A4P31645 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC6A4P31645 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC6A4P31645 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC6A4P31645 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 AL353779.1-201ENST00000434793 351 ntBASIC16.33■□□□□ 0.2
SLC6A4P31645 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 MEIS3P1-201ENST00000495167 958 ntBASIC16.33■□□□□ 0.2
SLC6A4P31645 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC6A4P31645 TIMM17BP1-201ENST00000545713 516 ntBASIC16.33■□□□□ 0.2
SLC6A4P31645 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 MIR4313-201ENST00000580760 101 ntBASIC16.33■□□□□ 0.2
SLC6A4P31645 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SLC6A4P31645 AC025048.6-201ENST00000634326 1161 ntBASIC16.33■□□□□ 0.2
SLC6A4P31645 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLC6A4P31645 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC6A4P31645 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A4P31645 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A4P31645 CROCCP1-201ENST00000426910 5675 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms