Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 AL662844.4-201ENST00000606367 2838 ntBASIC13.76□□□□□ -0.21
CD40P25942 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40P25942 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40P25942 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 PHKG1P2-201ENST00000457537 863 ntBASIC13.76□□□□□ -0.21
CD40P25942 MEIS3P1-201ENST00000495167 958 ntBASIC13.76□□□□□ -0.21
CD40P25942 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.76□□□□□ -0.21
CD40P25942 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.76□□□□□ -0.21
CD40P25942 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.76□□□□□ -0.21
CD40P25942 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CD40P25942 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.76□□□□□ -0.21
CD40P25942 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.76□□□□□ -0.21
CD40P25942 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.76□□□□□ -0.21
CD40P25942 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 AL450472.2-201ENST00000603663 1156 ntBASIC13.76□□□□□ -0.21
CD40P25942 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CD40P25942 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40P25942 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40P25942 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CD40P25942 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD40P25942 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.21
CD40P25942 AL596087.1-201ENST00000400979 1969 ntBASIC13.75□□□□□ -0.21
CD40P25942 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.75□□□□□ -0.21
CD40P25942 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 GAPDHP21-201ENST00000450301 1010 ntBASIC13.75□□□□□ -0.21
CD40P25942 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.75□□□□□ -0.21
CD40P25942 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.75□□□□□ -0.21
CD40P25942 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.75□□□□□ -0.21
CD40P25942 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD40P25942 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.75□□□□□ -0.21
CD40P25942 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.75□□□□□ -0.21
CD40P25942 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 CHCHD2P3-201ENST00000603038 451 ntBASIC13.75□□□□□ -0.21
CD40P25942 LINC01115-203ENST00000606068 577 ntBASIC13.75□□□□□ -0.21
CD40P25942 AC099568.2-201ENST00000609194 695 ntBASIC13.75□□□□□ -0.21
CD40P25942 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.75□□□□□ -0.21
CD40P25942 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 AC068587.6-202ENST00000641839 5619 ntBASIC13.75□□□□□ -0.21
CD40P25942 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CD40P25942 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CD40P25942 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.75□□□□□ -0.21
CD40P25942 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CD40P25942 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 MTHFR-217ENST00000641820 1569 ntBASIC13.75□□□□□ -0.21
CD40P25942 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40P25942 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40P25942 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CD40P25942 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CD40P25942 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CD40P25942 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms