Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 AC012640.2-201ENST00000561606 901 ntBASIC13.61□□□□□ -0.23
HIST1H1DP16402 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 AL009183.1-201ENST00000603760 355 ntBASIC13.61□□□□□ -0.23
HIST1H1DP16402 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 WASH6P-202ENST00000359512 1437 ntBASIC13.61□□□□□ -0.23
HIST1H1DP16402 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1DP16402 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H1DP16402 AC091951.1-201ENST00000512854 2465 ntBASIC13.61□□□□□ -0.23
HIST1H1DP16402 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.6□□□□□ -0.23
HIST1H1DP16402 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 AC018712.1-201ENST00000455767 687 ntBASIC13.6□□□□□ -0.23
HIST1H1DP16402 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 AC117500.6-201ENST00000624871 588 ntBASIC13.6□□□□□ -0.23
HIST1H1DP16402 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.6□□□□□ -0.23
HIST1H1DP16402 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HIST1H1DP16402 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H1DP16402 PMS2P7-201ENST00000506558 1336 ntBASIC13.6□□□□□ -0.23
HIST1H1DP16402 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms